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BaseInfo

ncRNA ID novel_ahy_miR1019
Species Arachis hypogaea
Class miRNA
Genome position Araip.B09:9954093-9954265 [-]
Reference genome Araip_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 1 - AUCAACGGUUAAAACAAUUGGAGC - 24
Stem-loop(if miRNA) --A                       C     ------        U        UUUUUA     C                       AG
   CCAGUUGUUUUAACCGUUGAUUU AAUUA      AUAUAUAU AUAUAUAU      UAAUU AGAUCAACGGUUAAAACAAUUGG  C
   ||||||||||||||||||||||| |||||      |||||||| ||||||||      ||||| |||||||||||||||||||||||  A
   GGUUAACAAAAUUGGCAACUAGA UUAAU      UAUAUAUA UAUAUAUA      AUUAA UUUAGUUGCCAAUUUUGUUGACC  G
CGA                       C     AUUUUU        U        ------     C                       AU
Stem-loop sequence ACCAGUUGUUUUAACCGUUGAUUUCAAUUAAUAUAUAUUAUAUAUAUUUUUUAUAAUUCAGAUCAACGGUUAAAACAAUUGGAGCAGUACCAGUUGUUUUAACCGUUGAUUUCAAUUAAUAUAUAUUAUAUAUAUUUUUUAUAAUUCAGAUCAACGGUUAAAACAAUUGGAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ737475.1
ncRNA:24   CGAGGUUAACAAAAUUGGCAACUA   1
  *|||=||||*||||||||||||||
targets:287   ACUCUAAUUAUUUUAACCGUUGAU   310

1.0 TSA: Arachis hypogaea CL5049Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01030686.1
ncRNA:24   CGAGGUUAACAAAAUUGGCAACUA   1
  *|||=||||*||||||||||||||
targets:483   ACUCUAAUUAUUUUAACCGUUGAU   506

1.0 TSA: Arachis hypogaea Unigene30707 mRNA sequence NA coding protein psRNATarget
JR570006.1
ncRNA:24   CGAGGUUAACAAAAUUGGCAACUA   1
  |=||||=||||||||||=||||||
targets:252   GUUCCAGUUGUUUUAACUGUUGAU   275

2.5 TSA: Arachis hypogaea Ahy.Unigene30319 mRNA sequence NA coding protein psRNATarget
GAER01053578.1
ncRNA:24   CGAGGUUAACAAAAUUGGCAACUA   1
  ||*||||||*|||||=||||||||
targets:486   GCACCAAUUAUUUUAGCCGUUGAU   509

2.5 TSA: Arachis hypogaea Unigene53617 mRNA sequence NA coding protein psRNATarget