ncRNA ID | novel_ahy_miR1019 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Araip.B09:9954093-9954265 [-] |
Reference genome | Araip_v1.0 |
Source | SRR2922380 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCAACGGUUAAAACAAUUGGAGC - 24 |
Stem-loop(if miRNA) |
--A                       C     ------        U        UUUUUA     C                       AG    CCAGUUGUUUUAACCGUUGAUUU AAUUA      AUAUAUAU AUAUAUAU      UAAUU AGAUCAACGGUUAAAACAAUUGG  C    ||||||||||||||||||||||| |||||      |||||||| ||||||||      ||||| |||||||||||||||||||||||  A    GGUUAACAAAAUUGGCAACUAGA UUAAU      UAUAUAUA UAUAUAUA      AUUAA UUUAGUUGCCAAUUUUGUUGACC  G CGA                       C     AUUUUU        U        ------     C                       AU |
Stem-loop sequence | ACCAGUUGUUUUAACCGUUGAUUUCAAUUAAUAUAUAUUAUAUAUAUUUUUUAUAAUUCAGAUCAACGGUUAAAACAAUUGGAGCAGUACCAGUUGUUUUAACCGUUGAUUUCAAUUAAUAUAUAUUAUAUAUAUUUUUUAUAAUUCAGAUCAACGGUUAAAACAAUUGGAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ737475.1 |
|
1.0 | TSA: Arachis hypogaea CL5049Contig1.Arhy mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01030686.1 |
|
1.0 | TSA: Arachis hypogaea Unigene30707 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
JR570006.1 |
|
2.5 | TSA: Arachis hypogaea Ahy.Unigene30319 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01053578.1 |
|
2.5 | TSA: Arachis hypogaea Unigene53617 mRNA sequence | NA | coding protein | psRNATarget |