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BaseInfo

ncRNA ID	novel_ahy_miR1016
Species	Arachis hypogaea
Class	miRNA
Genome position	Araip.B09:10394920-10395126 [-]
Reference genome	Araip_v1.0
Source	SRR2922380
Length	24
Mature sequence(if miRNA)	184 - GUGUGAUCUCUCAUCUUUAAUUCU - 207
Stem-loop(if miRNA)	--               U  A   C    A          A        G    A     GCAA G      --       AAGA    GG UC         UUG   GUGUGAUCUCUCAUC UU AUU UAUA GUGGGACCAA AAUAAAUA GAAA AGAGA    U AAGGGU  GAGAUUA    AUUU  A  CUCUAAAGU   A   ||||||||||||||| || ||| |||| |||||||||| |||||||| |||| |||||    | ||||||  |||||||    ||||  |  |||||||||   A   CACACUAGAGAGUGG AA UAA GUAU CACCCUGGUU UUAUUUAU CUUU UCUUU    A UUCCCA  UUCUAGU    UGAA  U  GAGAUUUCA   U UU               C  C   A    C          A        A    C     GAUA G      UC       ---G    -A GA         UUU
Stem-loop sequence	GUGUGAUCUCUCAUCUUUAAUUCUAUAAGUGGGACCAAAAAUAAAUAGGAAAAAGAGAGCAAUGAAGGGUGAGAUUAAAGAAUUUGGAUCCUCUAAAGUUUGAAUUUUACUUUAGAGAGUAAAGUGUGAUCUUCUACCCUUGAAUAGUUUCUCUUUCAUAUUUAUUAUUGGUCCCACCUAUGAAAUCAACGGUGAGAGAUCACACUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ722360.1	ncRNA:24   UCUUAAUUUCUACUCUCUAGUGUG   1   |||||||||||||||||||||||| targets:93   AGAAUUAAAGAUGAGAGAUCACAC   116 Target Full Sequence	0.0	TSA: Arachis hypogaea CL1Contig1376.Arhy mRNA sequence	NA	coding protein	psRNATarget
EZ739574.1	ncRNA:24   UCUUAAUUUCUACUCUCUAGUGUG   1   ||||||||||=||||||||||||| targets:180   AGAAUUAAAGGUGAGAGAUCACAC   203 Target Full Sequence	1.0	TSA: Arachis hypogaea CL18301Contig1.Arhy mRNA sequence	NA	coding protein	psRNATarget
GAER01031948.1	ncRNA:24   UCUUAAUUUCUACUCUCUAGUGUG   1   ||||||||||=||||||||||||= targets:374   AGAAUUAAAGGUGAGAGAUCACAU   397 Target Full Sequence	2.0	TSA: Arachis hypogaea Unigene31970 mRNA sequence	NA	coding protein	psRNATarget
EZ753160.1	ncRNA:24   UCUUAAUUUCUACUCUCUAGUGUG   1   |*||||||||=|*||||||||||| targets:232   AAAAUUAAAGGUUAGAGAUCACAC   255 Target Full Sequence	2.5	TSA: Arachis hypogaea CL7205Contig1.Arhy mRNA sequence	NA	coding protein	psRNATarget
GAER01026226.1	ncRNA:24   UC---UUAAUUUCUACUCUCUAGUGUG   1   ||---|||*||||=||||||||||||* targets:89   AGUGUAAUAAAAGGUGAGAGAUCACAA   115 Target Full Sequence	3.0	TSA: Arachis hypogaea Unigene26243 mRNA sequence	NA	coding protein	psRNATarget
GAER01015063.1	ncRNA:24   UCUUAAUUU-CUACUCUCUAGUGUG   1   **||*||||-|=||||||||||||| targets:71   UAAAAUAAAUGGUGAGAGAUCACAC   95 Target Full Sequence	3.0	TSA: Arachis hypogaea Unigene15071 mRNA sequence	NA	coding protein	psRNATarget
EZ722770.1	ncRNA:24   UCUUAAUUU-CUACUCUCUAGUGUG   1   **||*||||-|=||||||||||||| targets:416   UAAAAUAAAUGGUGAGAGAUCACAC   440 Target Full Sequence	3.0	TSA: Arachis hypogaea CL1Contig1786.Arhy mRNA sequence	NA	coding protein	psRNATarget
GAER01039482.1	ncRNA:24   UCUUAAUUUCUACUCUCUAGUGUG   1   =*|||*||*|=||||||||||||| targets:773   GAAAUCAAUGGUGAGAGAUCACAC   796 Target Full Sequence	3.0	TSA: Arachis hypogaea Unigene39509 mRNA sequence	NA	coding protein	psRNATarget