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BaseInfo

ncRNA ID novel_ahy_miR1015
Species Arachis hypogaea
Class miRNA
Genome position Araip.B09:10481478-10481679 [-]
Reference genome Araip_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 179 - GAUGAAAACGCUGACAUAUGUAUC - 202
Stem-loop(if miRNA) --                                            C       C          CA        A              ---  UUUAGAG
  GAUGAAAACGCUGACAUAUGUAUCCACACUAAAUUGAAACUAAA UUGUACC ACGCAAGAUG  CUCCGUGU ACAAAAGUACUCUG   UC       G
  |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  |||||||| ||||||||||||||   ||       G
  CUACUUUUGCGACUGUAUACAUGGGUGUGAUUUAGCUUUGAUUU AACAUGG UGCGUUCUAC  GAGGCACA UGUUUUCAUGGGAU   CC       U
UU                                            A       A          AG        C              GCA  GUGAGGU
Stem-loop sequence GAUGAAAACGCUGACAUAUGUAUCCACACUAAAUUGAAACUAAACUUGUACCCACGCAAGAUGCACUCCGUGUAACAAAAGUACUCUGUCUUUAGAGGGUUGGAGUGCCACGUAGGGUACUUUUGUCACACGGAGGACAUCUUGCGUAGGUACAAAUUUAGUUUCGAUUUAGUGUGGGUACAUAUGUCAGCGUUUUCAUCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01013839.1
ncRNA:24   CUAUGUAUACAGUCGCAAAAGUAG   1
  |=||||||||||||||||*|||||
targets:33   GGUACAUAUGUCAGCGUUAUCAUC   56

1.5 TSA: Arachis hypogaea Unigene13847 mRNA sequence NA coding protein psRNATarget
GAER01020095.1
ncRNA:24   CUAUGUAUACAGUCGCAAAAGUAG   1
  |=|||||||*||||=|||||||||
targets:154   GGUACAUAUAUCAGUGUUUUCAUC   177

2.5 TSA: Arachis hypogaea Unigene20104 mRNA sequence NA coding protein psRNATarget