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BaseInfo

ncRNA ID novel_ahy_miR1008
Species Arachis hypogaea
Class miRNA
Genome position Araip.B09:142667433-142667618 [-]
Reference genome Araip_v1.0
Source SRR2922380
Length 21
Mature sequence(if miRNA) 166 - UCUGGAGAACAAAUACAAGCU - 186
Stem-loop(if miRNA) --UC          A         A                                 C                   AUAAUAUAAACAAAA
    UGGAGAACAA UACAAGCUC AGAGGCACAAAAUCAACCGUUGAUGCAUCAAUA AUUUAUUUAUUAUUUUUUU               A
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
    ACCUCUUGUU AUGUUUGAG UCUCUGUGUUUUAGUUGGCAACUAUGUAGUUAU UAAAUAAAUAGUAAGAGAA               A
UUAA          C         G                                 A                   AUCAAAAUAUCUUUU
Stem-loop sequence UCUGGAGAACAAAUACAAGCUCAAGAGGCACAAAAUCAACCGUUGAUGCAUCAAUACAUUUAUUUAUUAUUUUUUUAUAAUAUAAACAAAAAAUUUUCUAUAAAACUAAAGAGAAUGAUAAAUAAAUAUAUUGAUGUAUCAACGGUUGAUUUUGUGUCUCUGGAGUUUGUACUUGUUCUCCAAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01013270.1
ncRNA:21   UCGAACAUAAACAAGAGGUCU   1
  |||||||||||||||||||||
targets:20   AGCUUGUAUUUGUUCUCCAGA   40

0.0 TSA: Arachis hypogaea Unigene13278 mRNA sequence NA coding protein psRNATarget
JR541379.1
ncRNA:21   UCGAACAUAAACAAGAGGUCU   1
  ||||**|||||||||||||||
targets:4413   AGCUGCUAUUUGUUCUCCAGA   4433

2.0 TSA: Arachis hypogaea Ahy.Unigene689 mRNA sequence NA coding protein psRNATarget
GAER01034152.1
ncRNA:21   UCGAACAUAAACAAGAGGUCU   1
  =||||||*||||||||||=||
targets:532   GGCUUGUCUUUGUUCUCCGGA   552

2.5 TSA: Arachis hypogaea Unigene34175 mRNA sequence NA coding protein psRNATarget