Search result

BaseInfo

ncRNA ID novel_ahy_miR1006
Species Arachis hypogaea
Class miRNA
Genome position Araip.B09:146335282-146335376 [-]
Reference genome Araip_v1.0
Source SRR2922380;SRR2922381
Length 21
Mature sequence(if miRNA) 1 - UGCCAAAGGAGAGUUGCCCUG - 21
Stem-loop(if miRNA) --     C      AC        AUA    ---- AAUAUACUAAUUC
  GGGCA CUCUUC  UGGCAUGU   AGUA    U             U
  ||||| ||||||  ||||||||   ||||    |             U
  CCCGU GAGAGG  ACCGUACA   CAUA    G             C
GU     U      AA        AUA    CACU GCAUCUUUAUGAA
Stem-loop sequence GGGCACCUCUUCACUGGCAUGUAUAAGUAUAAUAUACUAAUUCUUCAAGUAUUUCUACGGUCACAUACAUAACAUGCCAAAGGAGAGUUGCCCUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ753125.1
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  ==||||||*||||||||||||
targets:187   UGGGGCAAAUCUCCUUUGGCA   207

1.5 TSA: Arachis hypogaea CL7020Contig2.Arhy mRNA sequence NA coding protein psRNATarget
EZ753124.1
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  ==||||||*||||||||||||
targets:336   UGGGGCAAAUCUCCUUUGGCA   356

1.5 TSA: Arachis hypogaea CL7020Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01030995.1
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  =*||||||*||||||||||||
targets:104   UUGGGCAAAUCUCCUUUGGCA   124

1.5 TSA: Arachis hypogaea Unigene31016 mRNA sequence NA coding protein psRNATarget