Search result

BaseInfo

ncRNA ID ath-miRf10417-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - CCUCGUGGUCGAGUGAUGUG - NA
Stem-loop(if miRNA)    G AGA         U            AUG G   -GA UG  GG
GGU A   CACUCGACC CGGGGUCGAGUG   U AUC   G  AU  U
||| |   ||||||||| ||||||||||||   | |||   |  ||
CUA U   GUGAGCUGG GCUCCGGCUCAC   A UGG   U  UG  C
   G GUA         U            AGA G   AGG GU  GA
Stem-loop sequence GGUGAAGACACUCGACCUCGGGGUCGAGUGAUGUGAUCGAGUGAUGGUCAGGUUGUGGAGGUGAAGACACUCGGCCUCGUGGUCGAGUGAUGUGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183042.1
ncRNA:20   GUGUAGUGAGCUGGUGCUCC   1
  ||||||||||||||*|||||
targets:1613   CACAUCACUCGACCCCGAGG   1632

1.5 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget
EF183042.1
ncRNA:20   GUGUAGUGAGCUGGUGCUCC   1
  ||||||||||||||*|||||
targets:1671   CACAUCACUCGACCUCGAGG   1690

1.5 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget
EF183194.1
ncRNA:20   GUGUAGUGAGCUGGUGCUCC   1
  |||*|||||||||||=||||
targets:512   CACUUCACUCGACCAUGAGG   531

2.5 Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence NA coding protein psRNATarget