Search result

BaseInfo

ncRNA ID	novel_ahy_miR1005
Species	Arachis hypogaea
Class	miRNA
Genome position	Araip.B09:146336449-146336632 [-]
Reference genome	Araip_v1.0
Source	SRR2922380
Length	24
Mature sequence(if miRNA)	161 - UUGGUUUCUGUAUAAUUUAUUCAG - 184
Stem-loop(if miRNA)	--                      A     A                     C       U                       --AA   AU   UUGGUUUCUGUAUAAUUUAUUC GUGUU CUCAUCACAUAUUAUUAAAUU UUUAAAA AUUUUCUUUCCAAAAAUAAUAAA    AAU  U   |||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||    |||   AAUCAAAGAUAUAUUAAAUAAG CACAA GAGUAGUGUAUAAUAAUUUAA AAAUUUU UAAAAGAAAGGUUUUUGUUAUUU    UUA  U UU                      C     G                     A       C                       CAGG   GA
Stem-loop sequence	UUGGUUUCUGUAUAAUUUAUUCAGUGUUACUCAUCACAUAUUAUUAAAUUCUUUAAAAUAUUUUCUUUCCAAAAAUAAUAAAAAAAUAUUUAGAUUGGACUUUAUUGUUUUUGGAAAGAAAAUCUUUUAAAAAAUUUAAUAAUAUGUGAUGAGGAACACCGAAUAAAUUAUAUAGAAACUAAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ756635.1	ncRNA:24   GACU--UAUUUAAUAUGUCUUUGGUU   1   *|||--|||||*||||*||||||||| targets:339   GUGAUUAUAAACUAUAAAGAAACCAA   364 Target Full Sequence	2.5	TSA: Arachis hypogaea CL5533Contig1.Arhy mRNA sequence	NA	coding protein	psRNATarget