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BaseInfo

ncRNA ID ath-miRf10416-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - CACUCGGCCUCGGGGUCGAGU - NA
Stem-loop(if miRNA)    G AGA                      AUG G   -GA UG  GG
GGU A   CACUCGACCUCGGGGUCGAGUG   U AUC   G  AU  U
||| |   ||||||||||||||||||||||   | |||   |  ||
CUA U   GUGAGCUGGGGCUCCGGCUCAC   A UGG   U  UG  C
   G GUA                      AGA G   AGG GU  UA
Stem-loop sequence GGUGAAGACACUCGACCUCGGGGUCGAGUGAUGUGAUCGAGUGAUGGUCAUGUUGUGGAGGUGAAGACACUCGGCCUCGGGGUCGAGUGAUGUGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY227642.1
ncRNA:21   UGAGCUGGGGCUCCGGCUCAC   1
  ||||||||||||||=||||||
targets:856   ACUCGACCCCGAGGUCGAGUG   876

1.5 Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds NA coding protein psRNATarget
EF183042.1
ncRNA:21   UGAGCUGGGGCUCCGGCUCAC   1
  ||||||||||||||=||||||
targets:1619   ACUCGACCCCGAGGUCGAGUG   1639

1.5 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget
EF183042.1
ncRNA:21   UGAGCUGGGGCUCCGGCUCAC   1
  ||||||||=||||||||||||
targets:1677   ACUCGACCUCGAGGCCGAGUG   1697

1.5 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget