Search result

BaseInfo

ncRNA ID novel_ahy_miR990
Species Arachis hypogaea
Class miRNA
Genome position Araip.B08:15112169-15112226 [-]
Reference genome Araip_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 1 - CAAUGGCAGCAAAGAAUUAUCGGU - 24
Stem-loop(if miRNA) --U            AA  A G      GG
   GAUAGUUCUUUG  CU U AUUGUC  U
   ||||||||||||  || | ||||||
   CUAUUAAGAAAC  GA G UAACAG  A
UGG            --  C G      AU
Stem-loop sequence UGAUAGUUCUUUGAACUAUGAUUGUCGGUAUAGACAAUGGCAGCAAAGAAUUAUCGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR550036.1
ncRNA:24   UGGCUAUUAAGAAACGACGGUAAC   1
  |||||*||||||||||||||||||
targets:80   ACCGACAAUUCUUUGCUGCCAUUG   103

1.0 TSA: Arachis hypogaea Ahy.Unigene9647 mRNA sequence NA coding protein psRNATarget
EZ728613.1
ncRNA:24   UGGCUAUUAAGAAACGACGGUAAC   1
  |||||*||||||||||||||||||
targets:22   ACCGACAAUUCUUUGCUGCCAUUG   45

1.0 TSA: Arachis hypogaea CL1Contig7629.Arhy mRNA sequence NA coding protein psRNATarget
GAER01022282.1
ncRNA:24   UGGCUAUUAAGAAACGACGGUAAC   1
  |||||*||||||||||||||||||
targets:1825   ACCGACAAUUCUUUGCUGCCAUUG   1848

1.0 TSA: Arachis hypogaea Unigene22293 mRNA sequence NA coding protein psRNATarget
GAER01022282.1
ncRNA:24   UGGCUAUUAAGAAACGACGGUAAC   1
  |||||*||||||||||||||||||
targets:3044   ACCGACAAUUCUUUGCUGCCAUUG   3067

1.0 TSA: Arachis hypogaea Unigene22293 mRNA sequence NA coding protein psRNATarget
JR590271.1
ncRNA:22   GCUAUUAAGAAACGACGGUAAC   1
  |||*||||||||||||||||||
targets:1   CGACAAUUCUUUGCUGCCAUUG   22

1.0 TSA: Arachis hypogaea Ahy.Unigene58699 mRNA sequence NA coding protein psRNATarget