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BaseInfo

ncRNA ID novel_ahy_miR989
Species Arachis hypogaea
Class miRNA
Genome position Araip.B08:15979292-15979464 [-]
Reference genome Araip_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 150 - UGGAUCUUUUAAAUUUUGAAUUUU - 173
Stem-loop(if miRNA) --     C                 -          GA  AAGUAUGAUCUUUCAUCGUUUAUUUCAUAUGUAGAACUAAGAAAAAA
  UGGAU UUUUAAAUUUUGAAUUU UACUUUAGAA  UA                                               U
  ||||| ||||||||||||||||| ||||||||||  ||                                               A
  AUUUA AAGAUUUAAAACUUAAA GUGAAAUUUU  CC                                               U
AA     A                 A          -A  AUUUAGGAGAUUUCACGCUAGAGAAUGGAAAUUUAUUAAAGAAAGAG
Stem-loop sequence UGGAUCUUUUAAAUUUUGAAUUUUACUUUAGAAGAUAAAGUAUGAUCUUUCAUCGUUUAUUUCAUAUGUAGAACUAAGAAAAAAUAUGAGAAAGAAAUUAUUUAAAGGUAAGAGAUCGCACUUUAGAGGAUUUACCAUUUUAAAGUGAAAAUUCAAAAUUUAGAAAAUUUAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR546681.1
ncRNA:24   UUUUAAGUUUUAAAUUUUCUAGGU   1
  ****|||*|||||||||||||=||
targets:3029   CCUCUUCUAAAUUUAAAAGAUUCA   3052

2.5 TSA: Arachis hypogaea Ahy.Unigene6142 mRNA sequence NA coding protein psRNATarget
EZ740525.1
ncRNA:24   UUUUAAGUUUUAAAUUUUCUAGGU   1
  ****|||*|||||||||||||=||
targets:965   CCUCUUCUAAAUUUAAAAGAUUCA   988

2.5 TSA: Arachis hypogaea CL1770Contig1.Arhy mRNA sequence NA coding protein psRNATarget