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BaseInfo

ncRNA ID novel_ahy_miR979
Species Arachis hypogaea
Class miRNA
Genome position Araip.B01:2152042-2152213 [-]
Reference genome Araip_v1.0
Source SRR2922380;SRR2922381
Length 21
Mature sequence(if miRNA) 1 - UUGGACUGAAGGGAGCUCCCU - 21
Stem-loop(if miRNA) --A                 CUCAU       U        UU      G      AC        U  AA         ACACCCG
   GAGCUUCCUUCAGUCCA     GGACGAA AAAGGGAU  GAAUUA CUCCUG  UCAUUCAU CA  CGCAAUAGA       A
   |||||||||||||||||     ||||||| ||||||||  |||||| ||||||  |||||||| ||  |||||||||
   CUCGAGGGAAGUCAGGU     UCUGCUU UUUUUCUA  UUUAAU GAGGAC  AGUAAGUG GU  GCGUUAUCU       A
UCC                 UCAUU       -        -C      A      GU        U  AA         AUAGUAC
Stem-loop sequence AGAGCUUCCUUCAGUCCACUCAUGGACGAAUAAAGGGAUUUGAAUUAGCUCCUGACUCAUUCAUUCAAACGCAAUAGAACACCCGAACAUGAUAUCUAUUGCGAAUGUGUGAAUGAUGCAGGAGAUAAUUUCAUCUUUUUUUCGUCUUUACUUGGACUGAAGGGAGCUCCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01048873.1
ncRNA:21   UC--CCUCGAGGGAAGUCAGGUU   1
  ||--|||||||||||||||||||
targets:425   AGAAGGAGCUCCCUUCAGUCCAA   447

2.5 TSA: Arachis hypogaea Unigene48910 mRNA sequence NA coding protein psRNATarget
GAER01039202.1
ncRNA:21   UCCCUCGAGGGAAGUCAGGUU   1
  ***||||||||||||*|||||
targets:74   UUUGAGCUCCCUUCACUCCAA   94

2.5 TSA: Arachis hypogaea Unigene39229 mRNA sequence NA coding protein psRNATarget