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BaseInfo

ncRNA ID ath-miRf10414-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - GAGGUGAAGACACUCGGCCUCG - NA
Stem-loop(if miRNA)     A                 AUG G   -GA UG  GG
CACU GACCUCGGGGUCGAGUG   U AUC   G  AU  U
|||| |||||||||||||||||   | |||   |  ||
GUGA CUGGGGCUCCGGCUCAC   A UGG   U  UG  C
    A                 AGA G   AGG GU  GA
Stem-loop sequence CACUAGACCUCGGGGUCGAGUGAUGUGAUCGAGUGAUGGUCAGGUUGUGGAGGUGAAGACACUCGGCCUCGGGGUCAAGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183042.1
ncRNA:22   GCUCCGGCUCACAGAAGUGGAG   1
  |||||||||||||||||||||=
targets:1686   CGAGGCCGAGUGUCUUCACCUU   1707

1.0 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget
EF183194.1
ncRNA:22   GCUCCGGCUCACAGAAGUGGAG   1
  =||||=||||||||||||||||
targets:527   UGAGGUCGAGUGUCUUCACCUC   548

1.0 Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence NA coding protein psRNATarget
NM_103391.1
ncRNA:22   GCUCCGGCUCACAGAAGUGGAG   1
  ||*||=|||||||||||||||=
targets:1220   CGUGGUCGAGUGUCUUCACCUU   1241

2.0 Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA DNAse I-like superfamily protein(AT1G40390) coding protein psRNATarget