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BaseInfo

ncRNA ID ath-miRf10413-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - CACUCGGCCUCGGGGUCAAGU - NA
Stem-loop(if miRNA)    G AGA    A                 AUG G   -GA UG  GG
GGU A   CACU GACCUCGGGGUCGAGUG   U AUC   G  AU  U
||| |   |||| |||||||||||||||||   | |||   |  ||
CUA U   GUGA CUGGGGCUCCGGCUCAC   A UGG   U  UG  C
   G GUA    A                 AGA G   AGG GU  GA
Stem-loop sequence GGUGAAGACACUAGACCUCGGGGUCGAGUGAUGUGAUCGAGUGAUGGUCAGGUUGUGGAGGUGAAGACACUCGGCCUCGGGGUCAAGUGAUGUGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY227642.1
ncRNA:21   UGAACUGGGGCUCCGGCUCAC   1
  |||*||||||||||=||||||
targets:856   ACUCGACCCCGAGGUCGAGUG   876

2.5 Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds NA coding protein psRNATarget
EF183042.1
ncRNA:21   UGAACUGGGGCUCCGGCUCAC   1
  |||*||||||||||=||||||
targets:1619   ACUCGACCCCGAGGUCGAGUG   1639

2.5 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget
EF183042.1
ncRNA:21   UGAACUGGGGCUCCGGCUCAC   1
  |||*||||=||||||||||||
targets:1677   ACUCGACCUCGAGGCCGAGUG   1697

2.5 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget