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BaseInfo

ncRNA ID novel_ahy_miR964
Species Arachis hypogaea
Class miRNA
Genome position Araip.B09:17572329-17572429 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 19
Mature sequence(if miRNA) 1 - UGGAAGUAUUUGAGGGUCC - 19
Stem-loop(if miRNA) --         G       CUA        UGCAAU       U    AAU
  ACCCUCAAA GCUUCCA   CUCCAUGU      UGAUUAU GUCU   A
  ||||||||| |||||||   ||||||||      ||||||| ||||   U
  UGGGAGUUU UGAAGGU   GAGGUAUA      ACUGGUA UAGA   U
CC         A       ACG        -UUAUU       -    AAA
Stem-loop sequence ACCCUCAAAGGCUUCCACUACUCCAUGUUGCAAUUGAUUAUUGUCUAAUAUUAAAAGAUAUGGUCAUUAUUAUAUGGAGGCAUGGAAGUAUUUGAGGGUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR586725.1
ncRNA:19   CCUGGGAGUUUAUGAAGGU   1
  |*|||||*|||||||||||
targets:183   GAACCCUAAAAUACUUCCA   201

2.5 TSA: Arachis hypogaea Ahy.Unigene54632 mRNA sequence NA coding protein psRNATarget
JR579402.1
ncRNA:19   CCUGGGAGUUUAUGAAGGU   1
  |*|||||*|||||||||||
targets:238   GAACCCUAAAAUACUUCCA   256

2.5 TSA: Arachis hypogaea Ahy.Unigene44686 mRNA sequence NA coding protein psRNATarget
GAER01029345.1
ncRNA:19   CCUGGGAGUUUAUGAAGGU   1
  |*|||||*|||||||||||
targets:208   GAACCCUAAAAUACUUCCA   226

2.5 TSA: Arachis hypogaea Unigene29363 mRNA sequence NA coding protein psRNATarget
GAER01028207.1
ncRNA:19   CCUGGGAGUUUAUGAAGGU   1
  **||||||||||||||||*
targets:1360   AUACCCUCAAAUACUUCCU   1378

3.0 TSA: Arachis hypogaea Unigene28225 mRNA sequence NA coding protein psRNATarget