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BaseInfo

ncRNA ID novel_ahy_miR961
Species Arachis hypogaea
Class miRNA
Genome position Araip.B01:10742097-10742218 [-]
Reference genome Araip_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 99 - AAUUGGACUCUUCGAUUUAUGUUU - 122
Stem-loop(if miRNA) --   UG      U      A                   G    U      C        
  AAU  GACUCU CGAUUU UGUUUAAAAAAUUAAAAAG UUUG GGUACA AAAUUGGAC
  |||  |||||| |||||| ||||||||||||||||||| |||| |||||| ||||||||C
  UUA  CUGGGA GCUAAA AUAAAUUUUUUAAUUUUUU AAAC CCAUGU UUUAAUUUA
CA   GU      U      C                   -    C      A        
Stem-loop sequence AAUUGGACUCUUCGAUUUAUGUUUAAAAAAUUAAAAAGGUUUGUGGUACACAAAUUGGACCAUUUAAUUUAUGUACCCCAAAUUUUUUAAUUUUUUAAAUACAAAUCGUAGGGUCUGAUUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR586393.1
ncRNA:24   UUUGUAUUUAGCUUCUCAGGUUAA   1
  =||-=|||||*||||||||||*||
targets:590   GAA-GUAAAUGGAAGAGUCCAUUU   612

2.5 TSA: Arachis hypogaea Ahy.Unigene54016 mRNA sequence NA coding protein psRNATarget
GAER01027323.1
ncRNA:24   UUUGUAUUUAGCUUCUCAGGUUAA   1
  =||-=|||||*||||||||||*||
targets:1289   GAA-GUAAAUGGAAGAGUCCAUUU   1311

2.5 TSA: Arachis hypogaea Unigene27341 mRNA sequence NA coding protein psRNATarget