ncRNA ID | ath-miRf10412-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 23 |
Mature sequence(if miRNA) | NA - CUACUCGACCUCUGGGUCGAGUG - NA |
Stem-loop(if miRNA) |
   G   G          U            U  A  GCAGUGGU   G  ----CU       -  U GAU AGG CACUCGACCC GAGGUCGAGUGG GA GU        GAU UC      UUACUCG CC G ||| ||| |||||||||| |||||||||||| || ||        ||| ||      ||||||| || CUG UUU GUGAGCUGGG CUCCAGCUCAUC CU CG        CUA AG      GGUGAGC GG G    -   G          U            -  -  ---AAGUU   G  UUCUCU       U  U |
Stem-loop sequence | GAUGAGGGCACUCGACCCUGAGGUCGAGUGGUGAAGUGCAGUGGUGAUGUCCUUUACUCGCCUGGUGGUCGAGUGGUCUCUUGAGAUCUUGAAGCUCCUACUCGACCUCUGGGUCGAGUGGUUUGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AY227642.1 |
|
0.0 | Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
EF183042.1 |
|
2.5 | Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
AY227642.1 |
|
3.0 | Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
EF183194.1 |
|
3.0 | Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence | NA | coding protein | psRNATarget |