ncRNA ID | novel_ahy_miR952 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Araip.B07:7479524-7479692 [+] |
Reference genome | Araip_v1.0 |
Source | SRR2922380;SRR2922381 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UAGGCUUAUGACCUCUUUCCA - 21 |
Stem-loop(if miRNA) |
--    C      C       C          ----   -U  A         UUAA       UAU G    UUU   -       AAU   UAGG UUAUGA CUCUUUC AUCGCAUUAU    CAC  CG AUUGUGAGC    UUUCUUU   U AUAA   CUA UGGUGUA   A   |||| |||||| ||||||| ||||||||||    |||  || |||||||||    |||||||   | ||||   ||| |||||||   G   AUCC AAUAUU GAGAAAG UAGUGUAGUG    GUG  GU UGACACUCG    AAAGAAG   A UGUU   GAU AUUACGU   U UC    A      U       U          UGCU   UU  G         --UA       --U G    --U   C       AGU |
Stem-loop sequence | UAGGCUUAUGACCUCUUUCCAUCGCAUUAUCACUCGAAUUGUGAGCUUAAUUUCUUUUAUUGAUAAUUUCUAUGGUGUAAAUAGUUGAUGCAUUACUAGUUUGUGAUGAAGAAAAUGCUCACAGUGUGUUGUGUCGUGUGAUGUGAUUGAAAGAGUUUAUAAACCUACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
JR582445.1 |
|
2.5 | TSA: Arachis hypogaea Ahy.Unigene48325 mRNA sequence | NA | coding protein | psRNATarget |