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BaseInfo

ncRNA ID novel_ahy_miR952
Species Arachis hypogaea
Class miRNA
Genome position Araip.B07:7479524-7479692 [+]
Reference genome Araip_v1.0
Source SRR2922380;SRR2922381
Length 21
Mature sequence(if miRNA) 1 - UAGGCUUAUGACCUCUUUCCA - 21
Stem-loop(if miRNA) --    C      C       C          ----   -U  A         UUAA       UAU G    UUU   -       AAU
  UAGG UUAUGA CUCUUUC AUCGCAUUAU    CAC  CG AUUGUGAGC    UUUCUUU   U AUAA   CUA UGGUGUA   A
  |||| |||||| ||||||| ||||||||||    |||  || |||||||||    |||||||   | ||||   ||| |||||||   G
  AUCC AAUAUU GAGAAAG UAGUGUAGUG    GUG  GU UGACACUCG    AAAGAAG   A UGUU   GAU AUUACGU   U
UC    A      U       U          UGCU   UU  G         --UA       --U G    --U   C       AGU
Stem-loop sequence UAGGCUUAUGACCUCUUUCCAUCGCAUUAUCACUCGAAUUGUGAGCUUAAUUUCUUUUAUUGAUAAUUUCUAUGGUGUAAAUAGUUGAUGCAUUACUAGUUUGUGAUGAAGAAAAUGCUCACAGUGUGUUGUGUCGUGUGAUGUGAUUGAAAGAGUUUAUAAACCUACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR582445.1
ncRNA:21   ACCUUUCUCCAGUAUUCGGAU   1
  |||||||*||*||||||||||
targets:201   UGGAAAGUGGCCAUAAGCCUA   221

2.5 TSA: Arachis hypogaea Ahy.Unigene48325 mRNA sequence NA coding protein psRNATarget