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BaseInfo

ncRNA ID novel_ahy_miR949
Species Arachis hypogaea
Class miRNA
Genome position Araip.B01:19276123-19276222 [-]
Reference genome Araip_v1.0
Source SRR2922380
Length 21
Mature sequence(if miRNA) 80 - UCUGACUAUUUAAUUAACUGG - 100
Stem-loop(if miRNA) --  UG              U        CA       -AU  - UU   A
  UC  ACUAUUUAAUUAAC GGUCUAAG  GCUUUUG   AC A  AUU G
  ||  |||||||||||||| ||||||||  |||||||   || |  |||
  GG  UGAUAAAUUGAUUG CCAGAUUC  CGGAGAU   UG U  UAG U
AG  GU              C        AC       AUU  C UU   A
Stem-loop sequence UCUGACUAUUUAAUUAACUGGUCUAAGCAGCUUUUGAUACAUUAUUAGUAGAUUUUCGUUUAUAGAGGCCACUUAGACCCGUUAGUUAAAUAGUUGGGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR573526.1
ncRNA:21   GGUCAAUUAAUUUAUCAGUCU   1
  **|*|||||||||*|||||||
targets:54   AAAAUUAAUUAAAAAGUCAGA   74

2.5 TSA: Arachis hypogaea Ahy.Unigene36563 mRNA sequence NA coding protein psRNATarget