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BaseInfo

ncRNA ID ath-miRf10411-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UGUCGAUCGACACCCUGGUG - NA
Stem-loop(if miRNA)         CA G   U                  -----  A   AUA     --CUCC    CCGCAAAA     AAUU
UCGAUCGA  G ACU GGGUGUCGAUCGACACCA     UC UGA   GUUUC      UCCU        UUGUC    C
||||||||  | ||| ||||||||||||||||||     || |||   |||||      ||||        |||||
AGCUAGCU  U UGG CCCACAGCUAGCUGUGGU     AG ACU   CGGAG      AGGA        AACAG    C
        -A G   U                  CAAUG  A   --G     ACAAAA    --------     CUCA
Stem-loop sequence UCGAUCGACAGGACUUGGGUGUCGAUCGACACCAUCAUGAAUAGUUUCCUCCUCCUCCGCAAAAUUGUCAAUUCCACUCGACAAAGGAAAAACAGAGGCGUCAAGAGUAACUGGUGUCGAUCGACACCCUGGUGUAUCGAUCGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
DQ069810.1
ncRNA:20   GUGGUCCCACAGCUAGCUGU   1
  ||||*|||||||||||||||
targets:330   CACCUGGGUGUCGAUCGACA   349

1.0 Arabidopsis thaliana At2g13270 mRNA, partial sequence NA coding protein psRNATarget
EF183308.1
ncRNA:20   GUGGUCCCACAGCUAGCUGU   1
  *|||||*|||||||||||||
targets:1236   GACCAGAGUGUCGAUCGACA   1255

1.0 Arabidopsis thaliana clone asmbl_5244 unknown mRNA sequence NA coding protein psRNATarget
EF183309.1
ncRNA:20   GUGGUCCCACAGCUAGCUGU   1
  *|||||*|||||||||||||
targets:1328   GACCAGAGUGUCGAUCGACA   1347

1.0 Arabidopsis thaliana clone asmbl_5245 unknown mRNA sequence NA coding protein psRNATarget