ncRNA ID | ath-miRf10411-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - UGUCGAUCGACACCCUGGUG - NA |
Stem-loop(if miRNA) |
        CA G   U                  -----  A   AUA     --CUCC    CCGCAAAA     AAUU UCGAUCGA  G ACU GGGUGUCGAUCGACACCA     UC UGA   GUUUC      UCCU        UUGUC    C ||||||||  | ||| ||||||||||||||||||     || |||   |||||      ||||        ||||| AGCUAGCU  U UGG CCCACAGCUAGCUGUGGU     AG ACU   CGGAG      AGGA        AACAG    C         -A G   U                  CAAUG  A   --G     ACAAAA    --------     CUCA |
Stem-loop sequence | UCGAUCGACAGGACUUGGGUGUCGAUCGACACCAUCAUGAAUAGUUUCCUCCUCCUCCGCAAAAUUGUCAAUUCCACUCGACAAAGGAAAAACAGAGGCGUCAAGAGUAACUGGUGUCGAUCGACACCCUGGUGUAUCGAUCGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
DQ069810.1 |
|
1.0 | Arabidopsis thaliana At2g13270 mRNA, partial sequence | NA | coding protein | psRNATarget | |||||||||
EF183308.1 |
|
1.0 | Arabidopsis thaliana clone asmbl_5244 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EF183309.1 |
|
1.0 | Arabidopsis thaliana clone asmbl_5245 unknown mRNA sequence | NA | coding protein | psRNATarget |