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BaseInfo

ncRNA ID novel_ahy_miR942
Species Arachis hypogaea
Class miRNA
Genome position Araip.B06:43361784-43361937 [+]
Reference genome Araip_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 131 - GUUUACACUGUAAAUGAGAUACGU - 154
Stem-loop(if miRNA) --UC          -                                        A     A     AG   C AAAU
    AUCUCAUUUA AGUGUAAACGAAAUAAGAUUGCACGUAUCUCGUUUACACU UAAAC AGAUA  GCA G    G
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||  ||| |
    UAGAGUAAAU UCACAUUUGCUUUAUUUUAACGUGUAUAGAGCAAAUGUGA AUUUG UUUAU  UGU C    A
UGCA          G                                        A     C     -A   A AGAG
Stem-loop sequence UCAUCUCAUUUAAGUGUAAACGAAAUAAGAUUGCACGUAUCUCGUUUACACUAUAAACAAGAUAAGGCACGAAAUGAGAGACAUGUAUAUUUCGUUUAAAGUGUAAACGAGAUAUGUGCAAUUUUAUUUCGUUUACACUGUAAAUGAGAUACGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR578749.1
ncRNA:24   UGCAUAGAGUAAAUGUCACAUUUG   1
  *|*|||||||||||||||||||||
targets:46   CCUUAUCUCAUUUACAGUGUAAAC   69

0.0 TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence NA coding protein psRNATarget
GAER01058827.1
ncRNA:24   UGCAUAGAGUAAAUGUCACAUUUG   1
  |||||||||=||||||||||||||
targets:81   ACGUAUCUCGUUUACAGUGUAAAC   104

1.0 TSA: Arachis hypogaea Unigene58874 mRNA sequence NA coding protein psRNATarget
JR574604.1
ncRNA:24   UGC---AUAGAGUAAAUGUCACAUUUG   1
  |=|---||||||||||||||||||||*
targets:21   AUGGUUUAUCUCAUUUACAGUGUAAAG   47

1.0 TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence NA coding protein psRNATarget