Search result

BaseInfo

ncRNA ID novel_ahy_miR940
Species Arachis hypogaea
Class miRNA
Genome position Araip.B06:41782145-41782217 [+]
Reference genome Araip_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 1 - GGCUUAUGGACUGGUAGAGGACGU - 24
Stem-loop(if miRNA) --  C       -CU     A   CGUGCUA        U
  GG UUAUGGA   GGUAG GGA       GUGAAGGU G
  || |||||||   ||||| |||       |||||||| A
  CC AAUACUU   UCGUC CCU       CAUUUCCG A
AU  U       UAG     -   ------A        G
Stem-loop sequence GGCUUAUGGACUGGUAGAGGACGUGCUAGUGAAGGUUGAAGGCCUUUACAUCCCUGCUGAUUUCAUAAUCCUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01002194.1
ncRNA:24   UGCAGGAGAUGGUCAGGUAUUCGG   1
  |||||||||||||*|||||||||=
targets:12   ACGUCCUCUACCAAUCCAUAAGCU   35

2.5 TSA: Arachis hypogaea Unigene2195 mRNA sequence NA coding protein psRNATarget
GAER01023980.1
ncRNA:24   UGCAGGAGAUGGUCAGGUAUUCGG   1
  ***|||||||=|||||||*|||||
targets:2404   UGAUCCUCUAUCAGUCCACAAGCC   2427

2.5 TSA: Arachis hypogaea Unigene23991 mRNA sequence NA coding protein psRNATarget