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BaseInfo

ncRNA ID	ath-miRf10409-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - GUUGGUGUCGCUCGACACCG - NA
Stem-loop(if miRNA)	G          U       -U   UU      C        ---AAUC    CU GGG UUGGUGUCGA CGACACC  CUG  GUGUCG UCGACACC       GCGU  A ||| |||||||||| |||||||  |||  |||||| ||||||||       ||||  C CCC AGCCACAGCU GCUGUGG  GAC  CACAGC AGCUGUGG       CGUA  A    G          C       UU   -C      U        AAACCCU    UU
Stem-loop sequence	GGGGUUGGUGUCGAUCGACACCUCUGUUGUGUCGCUCGACACCAAUCGCGUCUACAUUAUGCUCCCAAAGGUGUCGAUCGACACCCAGUUGGUGUCGCUCGACACCGAGCCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY461650.1	ncRNA:20   GCCACAGCUCGCUGUGGUUG   1   =|||||=||||||||||*|| targets:303   UGGUGUUGAGCGACACCUAC   322 Target Full Sequence	2.5	Arabidopsis thaliana At2g10810 mRNA, partial sequence	NA	coding protein	psRNATarget
DQ069810.1	ncRNA:20   GCCACAGCUCGCUGUGGUUG   1   =*|||||||*|||||||||| targets:187   UAGUGUCGAACGACACCAAC   206 Target Full Sequence	2.5	Arabidopsis thaliana At2g13270 mRNA, partial sequence	NA	coding protein	psRNATarget
AY063833.1	ncRNA:20   GCCACAGCUCGCUGUGGUUG   1   =*|*|||||||||||||||* targets:484   UUGAGUCGAGCGACACCAAA   503 Target Full Sequence	3.0	Arabidopsis thaliana putative carboxypeptidase (At5g09640) mRNA, complete cds	NA	coding protein	psRNATarget
NM_121001.2	ncRNA:20   GCCACAGCUCGCUGUGGUUG   1   =*|*|||||||||||||||* targets:484   UUGAGUCGAGCGACACCAAA   503 Target Full Sequence	3.0	Arabidopsis thaliana serine carboxypeptidase-like 19 (SCPL19), mRNA	serine carboxypeptidase-like 19(SCPL19)	coding protein	psRNATarget
AY091309.1	ncRNA:20   GCCACAGCUCGCUGUGGUUG   1   =*|*|||||||||||||||* targets:425   UUGAGUCGAGCGACACCAAA   444 Target Full Sequence	3.0	Arabidopsis thaliana putative carboxypeptidase (At5g09640) mRNA, complete cds	NA	coding protein	psRNATarget
AY033947.1	ncRNA:20   GCCACAGCUCGCUGUGGUUG   1   =*|*|||||||||||||||* targets:425   UUGAGUCGAGCGACACCAAA   444 Target Full Sequence	3.0	Arabidopsis thaliana sinapoylglucose:choline sinapoyltransferase (SNG2) mRNA, complete cds	NA	coding protein	psRNATarget