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BaseInfo

ncRNA ID ath-miRf10408-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - CUCGCAAAAUUUGCGAGGGAAU - NA
Stem-loop(if miRNA)       A          CUG       G  A      GAACUGUAGUUGC
UCGCAA UCCCUCGCAA   UUGCGAG GA GUACUA             G
|||||| ||||||||||   ||||||| || ||||||
AGCGUU AGGGAGCGUU   AACGCUC UU ACAAAA             U
      A          UAA       G  G      GGAGCGUUUUGUG
Stem-loop sequence UCGCAAAUCCCUCGCAACUGUUGCGAGGGAAGUACUAGAACUGUAGUUGCGUGUGUUUUGCGAGGAAAACAGUUGCUCGCAAAAUUUGCGAGGGAAUUGCGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001344145.1
ncRNA:22   UAAGGGAGCGUUUAAAACGCUC   1
  *|*|=|*=||||||||||||||
targets:2385   CUGCUCAUGCAAAUUUUGCGAG   2406

3.0 Arabidopsis thaliana Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein mRNA Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein(AT5G36740) coding protein psRNATarget
NM_001344139.1
ncRNA:22   UAAGGGAGCGUUUAAAACGCUC   1
  *|*|=|*=||||||||||||||
targets:2385   CUGCUCAUGCAAAUUUUGCGAG   2406

3.0 Arabidopsis thaliana RING/FYVE/PHD zinc finger superfamily protein mRNA RING/FYVE/PHD zinc finger superfamily protein(AT5G36670) coding protein psRNATarget
NM_001344148.1
ncRNA:22   UAAGGGAGCGUUUAAAACGCUC   1
  *|*|=|*=||||||||||||||
targets:2073   CUGCUCAUGCAAAUUUUGCGAG   2094

3.0 Arabidopsis thaliana Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein partial mRNA Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein(AT5G36740) coding protein psRNATarget
NM_001344142.1
ncRNA:22   UAAGGGAGCGUUUAAAACGCUC   1
  *|*|=|*=||||||||||||||
targets:2073   CUGCUCAUGCAAAUUUUGCGAG   2094

3.0 Arabidopsis thaliana RING/FYVE/PHD zinc finger superfamily protein partial mRNA RING/FYVE/PHD zinc finger superfamily protein(AT5G36670) coding protein psRNATarget
NM_001344147.1
ncRNA:22   UAAGGGAGCGUUUAAAACGCUC   1
  *|*|=|*=||||||||||||||
targets:2088   CUGCUCAUGCAAAUUUUGCGAG   2109

3.0 Arabidopsis thaliana Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein mRNA Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein(AT5G36740) coding protein psRNATarget
NM_001344140.1
ncRNA:22   UAAGGGAGCGUUUAAAACGCUC   1
  *|*|=|*=||||||||||||||
targets:2088   CUGCUCAUGCAAAUUUUGCGAG   2109

3.0 Arabidopsis thaliana RING/FYVE/PHD zinc finger superfamily protein mRNA RING/FYVE/PHD zinc finger superfamily protein(AT5G36670) coding protein psRNATarget
NM_123024.2
ncRNA:22   UAAGGGAGCGUUUAAAACGCUC   1
  *|*|=|*=||||||||||||||
targets:2073   CUGCUCAUGCAAAUUUUGCGAG   2094

3.0 Arabidopsis thaliana RING/FYVE/PHD zinc finger superfamily protein partial mRNA RING/FYVE/PHD zinc finger superfamily protein(AT5G36670) coding protein psRNATarget
NM_001344141.1
ncRNA:22   UAAGGGAGCGUUUAAAACGCUC   1
  *|*|=|*=||||||||||||||
targets:2174   CUGCUCAUGCAAAUUUUGCGAG   2195

3.0 Arabidopsis thaliana RING/FYVE/PHD zinc finger superfamily protein mRNA RING/FYVE/PHD zinc finger superfamily protein(AT5G36670) coding protein psRNATarget
NM_001344144.1
ncRNA:22   UAAGGGAGCGUUUAAAACGCUC   1
  *|*|=|*=||||||||||||||
targets:2385   CUGCUCAUGCAAAUUUUGCGAG   2406

3.0 Arabidopsis thaliana Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein mRNA Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein(AT5G36740) coding protein psRNATarget
NM_001344146.1
ncRNA:22   UAAGGGAGCGUUUAAAACGCUC   1
  *|*|=|*=||||||||||||||
targets:2379   CUGCUCAUGCAAAUUUUGCGAG   2400

3.0 Arabidopsis thaliana Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein mRNA Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein(AT5G36740) coding protein psRNATarget