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BaseInfo

ncRNA ID novel_ahy_miR911
Species Arachis hypogaea
Class miRNA
Genome position Araip.B05:3028411-3028585 [+]
Reference genome Araip_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 1 - UGACAAAUGUAUCUAUAUAAGAAU - 24
Stem-loop(if miRNA) --   C                         A  A            ------  A   A   A  C     G     UAACAGACUAAUU
  UGA AAAUGUAUCUAUAUAAGAAUAAAAC AC AUUGUAACCACA      GG CUU UGU UG CAAAA UACCC             G
  ||| ||||||||||||||||||||||||| || ||||||||||||      || ||| ||| || ||||| |||||
  AUU UUUAUAUAGGUAUAUUCUUAUUUUG UG UAACAUUGGUGU      CC GAA ACA AC GUUUU AUGGG             C
CG   A                         C  C            UUUCUA  -   A   C  A     A     CCUACAACCAAUG
Stem-loop sequence UGACAAAUGUAUCUAUAUAAGAAUAAAACAACAAUUGUAACCACAGGACUUAUGUAUGCCAAAAGUACCCUAACAGACUAAUUGCGUAACCAACAUCCGGGUAAUUUUGACACACAAAAGCCAUCUUUUGUGGUUACAAUCGUCGUUUUAUUCUUAUAUGGAUAUAUUUAUUAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ756935.1
ncRNA:24   UAAGAAUAUAUCUAUGUAAACAGU   1
  ||||||||||=||||=||||||||
targets:26   AUUCUUAUAUGGAUAUAUUUGUCA   49

2.5 TSA: Arachis hypogaea CL7125Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01007745.1
ncRNA:24   UAAGAAUAUAUCUAUGUAAACAGU   1
  ||||||||||=|=|||||||||||
targets:10   AUUCUUAUAUGGGUACAUUUGUCA   33

2.5 TSA: Arachis hypogaea Unigene7752 mRNA sequence NA coding protein psRNATarget
JR571106.1
ncRNA:24   UAAG--AAUAUAUCUAUGUAAACAGU   1
  ||*|--||||||=||||=||||||||
targets:202   AUACAAUUAUAUGGAUAUAUUUGUCA   227

2.5 TSA: Arachis hypogaea Ahy.Unigene31871 mRNA sequence NA coding protein psRNATarget