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BaseInfo

ncRNA ID ath-miRf10407-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - AUUUGCGAGGGAAUUGCGAC - NA
Stem-loop(if miRNA)       AA      A          CUG       G  A      GAACUGUAGUUGC
GAAAAG  UCGCAA UCCCUCGCAA   UUGCGAG GA GUACUA             G
||||||  |||||| ||||||||||   ||||||| || ||||||
UUUUUC  AGCGUU AGGGAGCGUU   AACGCUC UU ACAAAA             U
      --      A          UAA       G  G      GGAGCGUUUUGUG
Stem-loop sequence GAAAAGAAUCGCAAAUCCCUCGCAACUGUUGCGAGGGAAGUACUAGAACUGUAGUUGCGUGUGUUUUGCGAGGAAAACAGUUGCUCGCAAAAUUUGCGAGGGAAUUGCGACUUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK230032.1
ncRNA:20   CAGCGUUAAGGGAGCGUUUA   1
  |*|||||*||||||||||||
targets:1328   GACGCAAAUCCCUCGCAAAU   1347

2.5 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-57-N05 NA coding protein psRNATarget