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BaseInfo

ncRNA ID novel_ahy_miR905
Species Arachis hypogaea
Class miRNA
Genome position Araip.B05:17771850-17771995 [+]
Reference genome Araip_v1.0
Source SRR2922380
Length 23
Mature sequence(if miRNA) 1 - ACUGAAAUUGGAACUGAAACAAU - 23
Stem-loop(if miRNA) ---ACUGA   UG -   UG     ----AU      ----------A     -- AGACAAUGAAAAAAGAAGAAAACAAA
        AAU  G AAC  AAACA      AGAAGA           UUUUU  A                          U
        |||  | |||  |||||      ||||||           |||||  |
        UUA  C UUG  UUUGU      UUUUCU           GUUUA  U                          G
UCUUAUUA   GU G   GU     GGAAUU      AGUAUAUGUGG     AG UGUAUGGGGACACGUCGUCGGAGAAA
Stem-loop sequence ACUGAAAUUGGAACUGAAACAAUAGAAGAAUUUUUAAGACAAUGAAAAAAGAAGAAAACAAAUGAAAGAGGCUGCUGCACAGGGGUAUGUUGAAUUUGGGUGUAUAUGAUCUUUUUUAAGGUGUUUUGGUUGCUGAUUAUUAUUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ738504.1
ncRNA:23   UAACAAAGUCAAGGUUAAAGUCA   1
  |||||||||*|||||||||||*|
targets:168   AUUGUUUCAAUUCCAAUUUCAUU   190

2.5 TSA: Arachis hypogaea CL10955Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01016360.1
ncRNA:23   UAACAAAGUCAAGGUUAAAGUCA   1
  **|*||*|||||||||||||=||
targets:81   CAUAUUACAGUUCCAAUUUCGGU   103

2.5 TSA: Arachis hypogaea Unigene16368 mRNA sequence NA coding protein psRNATarget
GAER01028772.1
ncRNA:23   UAA-C-AAAGUCAAGGUUAAAGUCA   1
  *||-|-|||||*|||||||||||||
targets:318   CUUCGAUUUCAAUUCCAAUUUCAGU   342

3.0 TSA: Arachis hypogaea Unigene28790 mRNA sequence NA coding protein psRNATarget