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BaseInfo

ncRNA ID novel_ahy_miR899
Species Arachis hypogaea
Class miRNA
Genome position Araip.B05:107414928-107415086 [-]
Reference genome Araip_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 1 - UUUUGUGCCUCUAGAACUUGUACU - 24
Stem-loop(if miRNA) --      C  C                        A                           AUAAUAUAAAUAAAA
  UACAAG UC AGAGGCAUAAAAUCAACCAUUGAU CAUCAAUACAUUUAUUUAUUAUUUUUU               U
  |||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||               A
  AUGUUC AG UCUCCGUGUUUUAGUUGGUAACUA GUAGUUAUGUAAAUAAAUAGUAAAAGA               U
UC      A  A                        C                           AAUCAAAAUAUCUUU
Stem-loop sequence UACAAGCUCCAGAGGCAUAAAAUCAACCAUUGAUACAUCAAUACAUUUAUUUAUUAUUUUUUAUAAUAUAAAUAAAAUAUUUUCUAUAAAACUAAAGAAAAUGAUAAAUAAAUGUAUUGAUGCAUCAAUGGUUGAUUUUGUGCCUCUAGAACUUGUACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR542485.1
ncRNA:24   UC-AU--GUUCAAGAUCUCCGUGUUUU   1
  ||-|=--|||||||*|||||||||||*
targets:337   AGAUGAUCAAGUUCCAGAGGCACAAAU   363

2.5 TSA: Arachis hypogaea Ahy.Unigene1832 mRNA sequence NA coding protein psRNATarget
GAER01008166.1
ncRNA:24   UCAUGUUCAAGAUCUCCGUGUUUU   1
  |||=-|||*|||*|||||||||||
targets:39   AGUG-AAGCUCUUGAGGCACAAAA   61

2.5 TSA: Arachis hypogaea Unigene8173 mRNA sequence NA coding protein psRNATarget