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BaseInfo

ncRNA ID novel_ahy_miR889
Species Arachis hypogaea
Class miRNA
Genome position Araip.B05:134986837-134986999 [-]
Reference genome Araip_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 140 - UGGAUCUUCUAAAUUUUGAAUUUU - 163
Stem-loop(if miRNA) --     CU                 -    U   A  -                  CAUUUAUU          GACCAAGAGAAA
  UGGAU  UCUAAAUUUUGAAUUUU AUUU AGA GA UAAAGUGUGAUUUUUUAU        UUAUAAAUAG            A
  |||||  ||||||||||||||||| |||| ||| || ||||||||||||||||||        ||||||||||
  ACCUA  AGAUUUAAAACUUAAAA UAAA UCU CU AUUUCACACUAGAGAGUG        AGUAUUUAUC            U
AA     AG                 C    C   -  C                  --------          AAAAAAAAAAUA
Stem-loop sequence UGGAUCUUCUAAAUUUUGAAUUUUAUUUUAGAAGAUAAAGUGUGAUUUUUUAUCAUUUAUUUUAUAAAUAGGACCAAGAGAAAAUAUAAAAAAAAAACUAUUUAUGAGUGAGAGAUCACACUUUACUCUCUCAAAUCAAAAUUCAAAAUUUAGAGAAUCCAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ748104.1
ncRNA:24   UUUUAAGUUUUAAAUCUUCUAGGU   1
  |||||||||||||||||=||||||
targets:526   AAAAUUCAAAAUUUAGAGGAUCCA   549

1.5 TSA: Arachis hypogaea CL1522Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01015063.1
ncRNA:24   UUUUAAGUUUUAAAUCUUCUAGGU   1
  =||||||||||||||||=||||||
targets:111   GAAAUUCAAAAUUUAGAGGAUCCA   134

1.5 TSA: Arachis hypogaea Unigene15071 mRNA sequence NA coding protein psRNATarget
GAER01010730.1
ncRNA:24   UUUUAAGUUUUAAAUCUUCUAGGU   1
  |||*||||||||||=||||||||=
targets:88   AAACUUCAAAAUUUGGAAGAUCCG   111

2.5 TSA: Arachis hypogaea Unigene10737 mRNA sequence NA coding protein psRNATarget
GAER01047416.1
ncRNA:24   UUUUAAGUUUUAAAUCUUCUAGGU   1
  =|||||||||*|||||||||*|||
targets:108   GAAAUUCAAACUUUAGAAGACCCA   131

2.5 TSA: Arachis hypogaea Unigene47452 mRNA sequence NA coding protein psRNATarget