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BaseInfo

ncRNA ID	ath-miRf10405-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - GGGGGUGAAUCCAUUCAUUGA - NA
Stem-loop(if miRNA)	A A          -               ---UUCA    CC AGAGGGGGUUAAUGAA G GGUUCACCCC UAGGGGGUGAAUCUA       UUCA  C |||||||||||||||| | |||||||||| |||||||||||||||       |||| UUUUCCCCAGUUACUU C CUAAGUGGGG AUCCCCCACUUGGGU       AAGU  C                 A -          G               UCUUAAC    UU
Stem-loop sequence	AGAGGGGGUUAAUGAAAGAGGUUCACCCCUAGGGGGUGAAUCUAUUCAUUCACCCCUUUGAACAAUUCUUGGGUUCACCCCCUAGGGGGUGAAUCCAUUCAUUGACCCCUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY074514.1	ncRNA:21   AGUUACUUACCUAAGUGGGGG   1   *|||||=|*|||||||||||| targets:13   GCAAUGGACGGAUUCACCCCC   33 Target Full Sequence	2.5	Arabidopsis thaliana putative n-calpain-1 large subunit (At1g55350) mRNA, partial cds	NA	coding protein	psRNATarget
AY061803.1	ncRNA:21   AGUUACUUACCUAAGUGGGGG   1   *|||||=|*|||||||||||| targets:4937   GCAAUGGACGGAUUCACCCCC   4957 Target Full Sequence	2.5	Arabidopsis thaliana calpain-like protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_180635.1	ncRNA:21   AGUUACUUACCUAAGUGGGGG   1   *|||||=|*|||||||||||| targets:4939   GCAAUGGACGGAUUCACCCCC   4959 Target Full Sequence	2.5	Arabidopsis thaliana calpain-type cysteine protease family (DEK1), mRNA	calpain-type cysteine protease family(DEK1)	coding protein	psRNATarget
NM_180636.1	ncRNA:21   AGUUACUUACCUAAGUGGGGG   1   *|||||=|*|||||||||||| targets:4939   GCAAUGGACGGAUUCACCCCC   4959 Target Full Sequence	2.5	Arabidopsis thaliana calpain-type cysteine protease family (DEK1), mRNA	calpain-type cysteine protease family(DEK1)	coding protein	psRNATarget
NM_001198309.1	ncRNA:21   AGUUACUUACCUAAGUGGGGG   1   *|||||=|*|||||||||||| targets:5334   GCAAUGGACGGAUUCACCCCC   5354 Target Full Sequence	2.5	Arabidopsis thaliana calpain-type cysteine protease family (DEK1), mRNA	calpain-type cysteine protease family(DEK1)	coding protein	psRNATarget
NM_001333707.1	ncRNA:21   AGUUACUUACCUAAGUGGGGG   1   *|||||=|*|||||||||||| targets:5262   GCAAUGGACGGAUUCACCCCC   5282 Target Full Sequence	2.5	Arabidopsis thaliana calpain-type cysteine protease family (DEK1), mRNA	calpain-type cysteine protease family(DEK1)	coding protein	psRNATarget
NM_104411.4	ncRNA:21   AGUUACUUACCUAAGUGGGGG   1   *|||||=|*|||||||||||| targets:5262   GCAAUGGACGGAUUCACCCCC   5282 Target Full Sequence	2.5	Arabidopsis thaliana calpain-type cysteine protease family (DEK1), mRNA	calpain-type cysteine protease family(DEK1)	coding protein	psRNATarget
NM_001333706.1	ncRNA:21   AGUUACUUACCUAAGUGGGGG   1   *|||||=|*|||||||||||| targets:5265   GCAAUGGACGGAUUCACCCCC   5285 Target Full Sequence	2.5	Arabidopsis thaliana calpain-type cysteine protease family (DEK1), mRNA	calpain-type cysteine protease family(DEK1)	coding protein	psRNATarget