Search result

BaseInfo

ncRNA ID	novel_ahy_miR877
Species	Arachis hypogaea
Class	miRNA
Genome position	Araip.B05:132878023-132878151 [+]
Reference genome	Araip_v1.0
Source	SRR2922380
Length	24
Mature sequence(if miRNA)	1 - GUGGAUGUGUCUAAUAAAAAUGUU - 24
Stem-loop(if miRNA)	--                 -A     U    UU   G    GUUUAAUAGGAGUGUCUUUAUAGA   GUGGAUGUGUCUAAUAA  AAUGU UUUU  AUA CUAU                        U   |||||||||||||||||  ||||| ||||  ||| ||||   CACCUACACAGAUUAUU  UUAUA AAAA  UAU UAUA                        A AG                 AA     U    UU   G    UAUUUCUCUGUGUAGGUCUUUUAU
Stem-loop sequence	GUGGAUGUGUCUAAUAAAAAUGUUUUUUUUAUAGCUAUGUUUAAUAGGAGUGUCUUUAUAGAUAUAUUUUCUGGAUGUGUCUCUUUAUAUAUGUAUUUAAAAUAUAUUAAUUAUUAGACACAUCCACGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GAER01003417.1	ncRNA:24   UUGUAAAAAUAAUCUGUGUAGGUG   1   =|=||||||||||||||||||||| targets:92   GAUAUUUUUAUUAGACACAUCCAC   115 Target Full Sequence	0.0	TSA: Arachis hypogaea Unigene3418 mRNA sequence	NA	coding protein	psRNATarget
EZ724198.1	ncRNA:24   UUGUAAAAAUAAUCUGUGUAGGUG   1   *|=||||||||||||||||||||| targets:41   UAUAUUUUUAUUAGACACAUCCAC   64 Target Full Sequence	0.0	TSA: Arachis hypogaea CL1Contig3214.Arhy mRNA sequence	NA	coding protein	psRNATarget
JR570579.1	ncRNA:24   UUGUAAAAAUAAUCUGUGUAGGUG   1   *|=||||||||||||||||||||| targets:14   UAUAUUUUUAUUAGACACAUCCAC   37 Target Full Sequence	0.0	TSA: Arachis hypogaea Ahy.Unigene30903 mRNA sequence	NA	coding protein	psRNATarget
GAER01020209.1	ncRNA:24   UUGUAAAAAUAAUCUGUGUAGGUG   1   =|=||||||||||||||=|||||| targets:64   GAUAUUUUUAUUAGACAUAUCCAC   87 Target Full Sequence	1.5	TSA: Arachis hypogaea Unigene20219 mRNA sequence	NA	coding protein	psRNATarget
EZ736185.1	ncRNA:24   UUGUAAAAAUAAUCUGUGUAGGUG   1   =|=||||||||||||||||||=|| targets:130   GAUAUUUUUAUUAGACACAUCUAC   153 Target Full Sequence	1.5	TSA: Arachis hypogaea CL163Contig1.Arhy mRNA sequence	NA	coding protein	psRNATarget
JR540757.1	ncRNA:24   UUGUAAAAAUAAUCUGUGUAGGUG   1   **|*||||||||||*||||||||| targets:599   UCCUUUUUUAUUAGUCACAUCCAC   622 Target Full Sequence	1.5	TSA: Arachis hypogaea Ahy.Unigene17 mRNA sequence	NA	coding protein	psRNATarget
GAER01030249.1	ncRNA:24   UUGUAAAAAUAAUCUGUGUAGGUG   1   **|*||||||||||*||||||||| targets:542   UCCUUUUUUAUUAGUCACAUCCAC   565 Target Full Sequence	1.5	TSA: Arachis hypogaea Unigene30269 mRNA sequence	NA	coding protein	psRNATarget
GAER01024616.1	ncRNA:24   UUGUAAAAAUAAUCUGUGUAGGUG   1   |=*=*||||||||||||||*|||= targets:2943   AGGGGUUUUAUUAGACACACCCAU   2966 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene24633 mRNA sequence	NA	coding protein	psRNATarget
GAER01024615.1	ncRNA:24   UUGUAAAAAUAAUCUGUGUAGGUG   1   |=*=*||||||||||||||*|||= targets:1362   AGGGGUUUUAUUAGACACACCCAU   1385 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene24632 mRNA sequence	NA	coding protein	psRNATarget