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BaseInfo

ncRNA ID novel_ahy_miR876
Species Arachis hypogaea
Class miRNA
Genome position Araip.B09:13447841-13447906 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - UUUACACUGUAAAUGAGAUAAGGC - 24
Stem-loop(if miRNA) --                    -AG   C  GC
  UUUACACUGUAAAUGAGAUA   GCA GU  A
  ||||||||||||||||||||   ||| ||  C
  AAAUGUGACAUUUACUCUAU   UGU CA  G
GC                    AUA   A  AU
Stem-loop sequence UUUACACUGUAAAUGAGAUAAGGCACGUGCACGUAACAUGUAUAUAUCUCAUUUACAGUGUAAACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR578749.1
ncRNA:24   CGGAAUAGAGUAAAUGUCACAUUU   1
  *|||||||||||||||||||||||
targets:45   ACCUUAUCUCAUUUACAGUGUAAA   68

0.0 TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence NA coding protein psRNATarget
JR574604.1
ncRNA:24   CGGAAUAGAGUAAAUGUCACAUUU   1
  |*=|||||||||||||||||||||
targets:23   GGUUUAUCUCAUUUACAGUGUAAA   46

0.0 TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence NA coding protein psRNATarget
GAER01058827.1
ncRNA:24   CG-GAAUAGAGUAAAUGUCACAUUU   1
  ||-|*||||||=|||||||||||||
targets:79   GCACGUAUCUCGUUUACAGUGUAAA   103

1.0 TSA: Arachis hypogaea Unigene58874 mRNA sequence NA coding protein psRNATarget
JR574604.1
ncRNA:24   CGGAAUAGAGUAAAUGUCACAUUU   1
  **||||||||=||||||*||||||
targets:177   UACUUAUCUCGUUUACACUGUAAA   200

2.5 TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence NA coding protein psRNATarget
GAER01003583.1
ncRNA:24   CGGAAU-AGAGUAAAUGUCACAUUU   1
  *=||*|-|||*||||||||||||||
targets:256   UUCUCACUCUGAUUUACAGUGUAAA   280

3.0 TSA: Arachis hypogaea Unigene3585 mRNA sequence NA coding protein psRNATarget