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BaseInfo

ncRNA ID ath-miRf10403-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 24
Mature sequence(if miRNA) NA - CCACUCGACCCCGAGGUCGAGUGU - NA
Stem-loop(if miRNA)     C        C CU        --A    ACAUCA
AGAC ACUCGACC C  GGUCGAGU   GAGG      C
|||| |||||||| |  ||||||||   ||||
UCUG UGAGCUGG G  CCAGCUCA   CUCC      C
    -        A CC        CCA    ACUUCA
Stem-loop sequence AGACCACUCGACCCCCUGGUCGAGUAGAGGACAUCACCACUUCACCUCACCACUCGACCCCGAGGUCGAGUGUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183005.1
ncRNA:24   UGUGAGCUGGAGCCCCAGCUCACC   1
  =|||||||||*|||||||||||||
targets:1923   GCACUCGACCACGGGGUCGAGUGG   1946

1.0 Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence NA coding protein psRNATarget
EF183005.1
ncRNA:24   UGUGAGCUGGAGCCCCAGCUCACC   1
  =||||||||||||*|||||||||*
targets:1864   GCACUCGACCUCGAGGUCGAGUGA   1887

2.5 Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence NA coding protein psRNATarget
EF183311.1
ncRNA:24   UGUGAGCUGGAGCCCCAGCUCACC   1
  *=||||||||**||||||||||||
targets:435   CUACUCGACCAGGGGGUCGAGUGG   458

2.5 Arabidopsis thaliana clone asmbl_5275 unknown mRNA sequence NA coding protein psRNATarget