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BaseInfo

ncRNA ID novel_ahy_miR859
Species Arachis hypogaea
Class miRNA
Genome position Araip.B04:125555154-125555312 [-]
Reference genome Araip_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 136 - AAGGACUAAAUUGAAUACCGAUUU - 159
Stem-loop(if miRNA) --                A       G     CA   A  AUUUUAGGCAUUUACUCAAUAAAAUUUUGAUACCCAAUAA
  AAGGACUAAAUUGAAU CCGAUUU AAAUU  GGG CC                                        U
  |||||||||||||||| ||||||| |||||  ||| ||                                        G
  UUUCUGGUUUAACUUG GGUUGAA UUUAA  UCC UC                                        A
AA                -       G     AA   -  AGUUUAAUUUAUAAUUGAAUAAGGAGGAAGAGUGGAUUCA
Stem-loop sequence AAGGACUAAAUUGAAUACCGAUUUGAAAUUCAGGGACCAUUUUAGGCAUUUACUCAAUAAAAUUUUGAUACCCAAUAAUGAACUUAGGUGAGAAGGAGGAAUAAGUUAAUAUUUAAUUUGACUCCUAAAAUUUGAAGUUGGGUUCAAUUUGGUCUUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01058197.1
ncRNA:24   UUUAGCCAUAAGUUAAAUCAGGAA   1
  ||=--|||*||||||||=||||||
targets:103   AAG--GGUUUUCAAUUUGGUCCUU   124

2.5 TSA: Arachis hypogaea Unigene58244 mRNA sequence NA coding protein psRNATarget
JR556400.1
ncRNA:24   UUUAGCCAUAAGUUAAAUCAGGAA   1
  =*||=*||||*||||||||||||*
targets:4   GUAUUUGUAUCCAAUUUAGUCCUC   27

3.0 TSA: Arachis hypogaea Ahy.Unigene16212 mRNA sequence NA coding protein psRNATarget