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BaseInfo

ncRNA ID novel_ahy_miR857
Species Arachis hypogaea
Class miRNA
Genome position Araip.B04:129556437-129556562 [-]
Reference genome Araip_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 1 - ACGUGAAGUUGACUGCACUUGAGU - 24
Stem-loop(if miRNA) --                                A    A        A    UUUGACUAAU
  UUAGGUGCAGUCGAUUUUACGUAAAGUUGAUA UUGA AGCUGUUA AUAA          U
  |||||||||||||||||||||||||||||||| |||| |||||||| ||||
  AGUUCACGUCAGUUGAAGUGCAUUUCAAUUAU AACU UCGGCAAU UAUU          U
UG                                C    C        C    UUUAAAUCAG
Stem-loop sequence UUAGGUGCAGUCGAUUUUACGUAAAGUUGAUAAUUGAAAGCUGUUAAAUAAUUUGACUAAUUUGACUAAAUUUUUAUCUAACGGCUCUCAACUAUUAACUUUACGUGAAGUUGACUGCACUUGAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01000868.1
ncRNA:24   UGAGUUCACGUCAGUUGAAGUGCA   1
  ||||||||||||||||||||||||
targets:223   ACUCAAGUGCAGUCAACUUCACGU   246

0.0 TSA: Arachis hypogaea Unigene869 mRNA sequence NA coding protein psRNATarget
GAER01028018.1
ncRNA:24   UGAGUUCACGUCAGUUGAAGUGCA   1
  |||||||||*||||||||||||||
targets:942   ACUCAAGUGAAGUCAACUUCACGU   965

1.0 TSA: Arachis hypogaea Unigene28036 mRNA sequence NA coding protein psRNATarget
JR551010.1
ncRNA:24   UGAGUUCACGUCAGUUGAAGUGCA   1
  |||||||||=||||=|||||||||
targets:5   ACUCAAGUGUAGUCGACUUCACGU   28

2.5 TSA: Arachis hypogaea Ahy.Unigene10638 mRNA sequence NA coding protein psRNATarget
GAER01004465.1
ncRNA:24   UGAGUUCACGUCAGUUGAAGUGCA   1
  |||||=||||||||=|||||||||
targets:47   ACUCAGGUGCAGUCGACUUCACGU   70

2.5 TSA: Arachis hypogaea Unigene4467 mRNA sequence NA coding protein psRNATarget
JR561152.1
ncRNA:24   UGAGUUCACGUCAGUUGAAGUGCA   1
  |=|||=||||||||=|||||||||
targets:83   AUUCAGGUGCAGUCGACUUCACGU   106

2.5 TSA: Arachis hypogaea Ahy.Unigene21158 mRNA sequence NA coding protein psRNATarget
GAER01019374.1
ncRNA:24   UGAGUUCACGUCAGUUGAAGUGCA   1
  |||||||||*||||=|||||||||
targets:1366   ACUCAAGUGAAGUCGACUUCACGU   1389

2.5 TSA: Arachis hypogaea Unigene19383 mRNA sequence NA coding protein psRNATarget
GAER01001304.1
ncRNA:24   UGAGUUCACGUCAGUUGAAGUGCA   1
  |=|||=|||||*||||||||||||
targets:191   AUUCAGGUGCAAUCAACUUCACGU   214

2.5 TSA: Arachis hypogaea Unigene1305 mRNA sequence NA coding protein psRNATarget
JR550778.1
ncRNA:24   UGAGUUCACGUCAGUUGAAGUGCA   1
  |=*||=|||||||||||||||=||
targets:29   AUACAGGUGCAGUCAACUUCAUGU   52

2.5 TSA: Arachis hypogaea Ahy.Unigene10402 mRNA sequence NA coding protein psRNATarget
GAER01050509.1
ncRNA:21   GUUCACGUCAGUUGAAGUGCA   1
  ||=||||||||=|||||||||
targets:1   CAGGUGCAGUCGACUUCACGU   21

2.5 TSA: Arachis hypogaea Unigene50547 mRNA sequence NA coding protein psRNATarget