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BaseInfo

ncRNA ID novel_ahy_miR856
Species Arachis hypogaea
Class miRNA
Genome position Araip.B04:130170233-130170395 [+]
Reference genome Araip_v1.0
Source SRR2922380;SRR2922381
Length 21
Mature sequence(if miRNA) 1 - UGAGUAAUUUAAAGAUGUAGU - 21
Stem-loop(if miRNA) --  A           A                       G                 C                      
  UG GUAAUUUAAAG UGUAGUGUGUUUUUAUUUGAUUG UGGUUGUUUAUGUUGUU AAGAAAGUUAUUGGUUACCUAGC
  || ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||A
  AC CAUUAAAUUUC ACAUCAUAUAAAAAUAAACUAAC ACCAACAAGUACAACAA UUUUUUCAAUAACCAAUGGAUUU
UC  C           C                       G                 A                      
Stem-loop sequence UGAGUAAUUUAAAGAUGUAGUGUGUUUUUAUUUGAUUGGUGGUUGUUUAUGUUGUUCAAGAAAGUUAUUGGUUACCUAGCAUUUAGGUAACCAAUAACUUUUUUAAACAACAUGAACAACCAGCAAUCAAAUAAAAAUAUACUACACCUUUAAAUUACCCACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR544881.1
ncRNA:21   UGAUGUAGAAAUUUAAUGAGU   1
  *=|||||=||||*||||||||
targets:188   UUUACAUUUUUAUAUUACUCA   208

2.5 TSA: Arachis hypogaea Ahy.Unigene4279 mRNA sequence NA coding protein psRNATarget