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BaseInfo

ncRNA ID novel_ahy_miR849
Species Arachis hypogaea
Class miRNA
Genome position Araip.B03:230464-230623 [+]
Reference genome Araip_v1.0
Source SRR2922380
Length 21
Mature sequence(if miRNA) 140 - UUGGAUCUCUUAUAAAAACUG - 160
Stem-loop(if miRNA) --                                            A         -------------           AG    G
  GUUUUUAUAAGAGAUCCAACUUUUCUAACAAGACAUUAAAAAAA UAACAAUGC             UCCUGAGUGUC  CCUC A
  |||||||||||||||||||||||||||||||||||||||||||| |||||||||             |||||||||||  |||| U
  CAAAAAUAUUCUCUAGGUUGAAAGGAUUGUUCUGUAAUUUUUUU AUUGUUACG             AGGACUCACAG  GGAG A
GU                                            -         AGUUCCGUAAUUU           -G    U
Stem-loop sequence GUUUUUAUAAGAGAUCCAACUUUUCUAACAAGACAUUAAAAAAAAUAACAAUGCUCCUGAGUGUCAGCCUCGAUAUGAGGGGACACUCAGGAUUUAAUGCCUUGAGCAUUGUUAUUUUUUUAAUGUCUUGUUAGGAAAGUUGGAUCUCUUAUAAAAACUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR567944.1
ncRNA:21   GUCAAAAAUAUUCUCUAGGUU   1
  ==*|||||||||||||*||||
targets:520   UGAUUUUUAUAAGAGACCCAA   540

2.5 TSA: Arachis hypogaea Ahy.Unigene28195 mRNA sequence NA coding protein psRNATarget