ncRNA ID | novel_ahy_miR848 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Araip.B03:19946516-19946727 [+] |
Reference genome | Araip_v1.0 |
Source | SRR2922380 |
Length | 24 |
Mature sequence(if miRNA) | 189 - GUGUGUUGUGAUGUUACUUAACGU - 212 |
Stem-loop(if miRNA) |
--A    A     C          U     A                --      A  A        C                AA     -     GA   AC    G    UUAA UGACA UACAACACAU UCUAG AGUUUUAAUUGACUAU  UAACAU AU AAUUUAUA AAUUAGAUCAAAUUAA  CUUAA UUGAG  AGA  UUGA G    |||| ||||| |||||||||| ||||| ||||||||||||||||  |||||| || |||||||| ||||||||||||||||  ||||| |||||  |||  ||||    AAUU AUUGU GUGUUGUGUG GGAUU UCAGAAUUAACUGAUA  AUUGUA UA UUAAAUAU UUGGUCUAGUUUAGUU  GAGUU AACUC  UCU  AAUU U UGC    C     A          U     A                UA      C  A        U                -G     U     --   AA    A |
Stem-loop sequence | AUUAAAUGACACUACAACACAUUUCUAGAAGUUUUAAUUGACUAUUAACAUAAUAAAUUUAUACAAUUAGAUCAAAUUAAAACUUAAUUGAGGAAGAACUUGAGGUAUUAAAAUCUCUCAAUUUGAGGUUGAUUUGAUCUGGUUUUAUAAAUUAAUCAUGUUAAUAUAGUCAAUUAAGACUAUUAGGUGUGUGUUGUGAUGUUACUUAACGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GAER01023516.1 |
|
2.5 | TSA: Arachis hypogaea Unigene23527 mRNA sequence | NA | coding protein | psRNATarget |