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BaseInfo

ncRNA ID novel_ahy_miR848
Species Arachis hypogaea
Class miRNA
Genome position Araip.B03:19946516-19946727 [+]
Reference genome Araip_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 189 - GUGUGUUGUGAUGUUACUUAACGU - 212
Stem-loop(if miRNA) --A    A     C          U     A                --      A  A        C                AA     -     GA   AC    G
   UUAA UGACA UACAACACAU UCUAG AGUUUUAAUUGACUAU  UAACAU AU AAUUUAUA AAUUAGAUCAAAUUAA  CUUAA UUGAG  AGA  UUGA G
   |||| ||||| |||||||||| ||||| ||||||||||||||||  |||||| || |||||||| ||||||||||||||||  ||||| |||||  |||  ||||
   AAUU AUUGU GUGUUGUGUG GGAUU UCAGAAUUAACUGAUA  AUUGUA UA UUAAAUAU UUGGUCUAGUUUAGUU  GAGUU AACUC  UCU  AAUU U
UGC    C     A          U     A                UA      C  A        U                -G     U     --   AA    A
Stem-loop sequence AUUAAAUGACACUACAACACAUUUCUAGAAGUUUUAAUUGACUAUUAACAUAAUAAAUUUAUACAAUUAGAUCAAAUUAAAACUUAAUUGAGGAAGAACUUGAGGUAUUAAAAUCUCUCAAUUUGAGGUUGAUUUGAUCUGGUUUUAUAAAUUAAUCAUGUUAAUAUAGUCAAUUAAGACUAUUAGGUGUGUGUUGUGAUGUUACUUAACGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01023516.1
ncRNA:24   UGCAAUUCAUUGUAGUGUUGUGUG   1
  |=|--|||||||*||||||||||=
targets:2015   AUG--AAGUAACUUCACAACACAU   2036

2.5 TSA: Arachis hypogaea Unigene23527 mRNA sequence NA coding protein psRNATarget