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BaseInfo

ncRNA ID novel_ahy_miR843
Species Arachis hypogaea
Class miRNA
Genome position Araip.B03:11586270-11586339 [-]
Reference genome Araip_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 1 - UUUAUACUGUAAAUGAGAUACGUA - 24
Stem-loop(if miRNA) --U              C           AAA  UU
   GUAUCUCGUUUACA UGUAAAUGAGA   GC  G
   |||||||||||||| |||||||||||   ||
   CAUAGAGUAAAUGU AUAUUUGCUCU   CG  C
AUG              C           --A  CA
Stem-loop sequence UGUAUCUCGUUUACACUGUAAAUGAGAAAAGCUUGCACGCAUCUCGUUUAUACUGUAAAUGAGAUACGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR574604.1
ncRNA:24   AU--GCAUAGAGUAAAUGUCAUAUUU   1
  ||--|||||||||||||||*||||||
targets:58   UAGCCGUAUCUCAUUUACACUAUAAA   83

1.5 TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence NA coding protein psRNATarget
JR574604.1
ncRNA:24   AUGC---AUAGAGUAAAUGUCAUAUUU   1
  *|=|---|||||||||||||||=||||
targets:20   CAUGGUUUAUCUCAUUUACAGUGUAAA   46

1.5 TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence NA coding protein psRNATarget
JR578749.1
ncRNA:24   AUGCAUAGAGUAAAUGUCAUAUUU   1
  **|*|||||||||||||||=||||
targets:45   ACCUUAUCUCAUUUACAGUGUAAA   68

1.5 TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence NA coding protein psRNATarget
GAER01058827.1
ncRNA:24   AUGCAUAGAGUAAAUGUCAUAUUU   1
  *|||||||||=||||||||=||||
targets:80   CACGUAUCUCGUUUACAGUGUAAA   103

2.5 TSA: Arachis hypogaea Unigene58874 mRNA sequence NA coding protein psRNATarget