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BaseInfo

ncRNA ID	ath-miRf10400-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - CUACUCGACCUCGUGGUCGAGUG - NA
Stem-loop(if miRNA)	G            UGUU    AG G ACUACUCGACCA GGGGUCGAGUGG    GUGA  U G |||||||||||| ||||||||||||    ||||  | UGGUGAGCUGGU CUCCAGCUCAUC    UACU  A U             G            ----    GA G
Stem-loop sequence	ACUACUCGACCAGGGGGUCGAGUGGUGUUGUGAAGUGGUGAAGUCAUCUACUCGACCUCGUGGUCGAGUGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183042.1	ncRNA:23   GUGAGCUGGUGCUCCAGCUCAUC   1   ||||||||||||||||||||||| targets:1527   CACUCGACCACGAGGUCGAGUAG   1549 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183194.1	ncRNA:23   GUGAGCUGGUGCUCCAGCUCAUC   1   |||||||||||*||||||||||| targets:450   CACUCGACCACCAGGUCGAGUAG   472 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:23   GUGAGCUGGUGCUCCAGCUCAUC   1   |||||||||||||||||||||=* targets:1151   CACUCGACCACGAGGUCGAGUGU   1173 Target Full Sequence	2.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
NM_103391.1	ncRNA:23   GUGAGCUGGUGCUCCAGCUCAUC   1   |||||||||*|||||||||*||| targets:1060   CACUCGACCCCGAGGUCGACUAG   1082 Target Full Sequence	2.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
NM_103391.1	ncRNA:23   GUGAGCUGGUGCUCCAGCUCAUC   1   |||||||||*|*||||||||||| targets:1105   CACUCGACCCCCAGGUCGAGUAG   1127 Target Full Sequence	2.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
AY227642.1	ncRNA:23   GUGAGCUGGUGCUCCAGCUCAUC   1   |||||||||**|||||||||||| targets:764   CACUCGACCCAGAGGUCGAGUAG   786 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
AY227642.1	ncRNA:23   GUGAGCUGGUGCUCCAGCUCAUC   1   ||||||||*||*||||||||||| targets:809   CACUCGACAACCAGGUCGAGUAG   831 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:23   GUGAGCUGGUGCUCCAGCUCAUC   1   |||||*|||||*||||||||||| targets:45   CACUCAACCACAAGGUCGAGUAG   67 Target Full Sequence	2.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:23   GUGAGCUGGUGCUCCAGCUCAUC   1   |||||||||*||*|||||||||| targets:490   CACUCGACCCCGUGGUCGAGUAG   512 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget