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BaseInfo

ncRNA ID novel_ahy_miR831
Species Arachis hypogaea
Class miRNA
Genome position Araip.B03:135803893-135804093 [-]
Reference genome Araip_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 178 - CGCUGGAUGAUGAGUAAACGACGU - 201
Stem-loop(if miRNA) --      A                 UG      C                        AUCUUU  UUU  --AUA      --        -  -----CA   A
  CGCUGG UGAUGAGUAAACGACGU  UUUAUC UUGGUGCCCAAACAAGUCAGAAAU      GC   GU     UGAAGG  GAGAAGAA AC       UGG A
  |||||| |||||||||||||||||  |||||| ||||||||||||||||||||||||      ||   ||     ||||||  |||||||| ||       |||
  GUGAUC ACUACUCAUUUGCUGCA  AAAUGG AACUACGGGUUUGUUCAGUCUUUA      CG   CA     AUUUCU  UUCUUCUU UG       ACC A
GU      C                 GU      A                        ---CUU  UAU  CCUCC      UA        A  AAAUAAA   C
Stem-loop sequence CGCUGGAUGAUGAGUAAACGACGUUGUUUAUCCUUGGUGCCCAAACAAGUCAGAAAUAUCUUUGCUUUGUAUAUGAAGGGAGAAGAAACCAUGGAAACCCAAAAUAAAGUAUUCUUCUUAUUCUUUACCUCCACUAUGCUUCAUUUCUGACUUGUUUGGGCAUCAAAGGUAAAUGACGUCGUUUACUCAUCACCUAGUGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ749559.1
ncRNA:24   UGCAGCAAA-UGAGUAGUAGGUCGC   1
  ||***||||-||||||||||||||*
targets:594   ACAAAGUUUCACUCAUCAUCCAGCC   618

3.0 TSA: Arachis hypogaea CL8272Contig1.Arhy mRNA sequence NA coding protein psRNATarget