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BaseInfo

ncRNA ID	novel_ahy_miR825
Species	Arachis hypogaea
Class	miRNA
Genome position	Araip.B01:135435809-135435970 [+]
Reference genome	Araip_v1.0
Source	SRR2922380
Length	24
Mature sequence(if miRNA)	139 - CGACUGCACCUGAAUUUCCACCUU - 162
Stem-loop(if miRNA)	--    A   A       A           UA            C   A           AAAAAAUUAGUCAAA    UCA   GGUG AAA UCAGGUG AGUCGAUUUCA  UGAAGUUGAUAU UGA AGCUGUUAGAU               UUAG   A   |||| ||| ||||||| |||||||||||  |||||||||||| ||| |||||||||||               ||||   A   CCAC UUU AGUCCAC UCAGCUGAAGU  ACUUCAACUAUA ACU UCGGCAAUUUA               AAUC   U UU    C   A       G           GC            A   C           ---CUAAACUGACUA    UAC
Stem-loop sequence	GGUGAAAAAUCAGGUGAAGUCGAUUUCAUAUGAAGUUGAUAUCUGAAAGCUGUUAGAUAAAAAAUUAGUCAAAUUAGUCAAAUCAUCUAAAUCAGUCAAAUCAUUUAACGGCUCUCAAAUAUCAACUUCACGUGAAGUCGACUGCACCUGAAUUUCCACCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GAER01004465.1	ncRNA:24   UUCCACCUUUAAGUCCACGUCAGC   1   ||||||||||*||||||||||||| targets:38   AAGGUGGAAACUCAGGUGCAGUCG   61 Target Full Sequence	1.0	TSA: Arachis hypogaea Unigene4467 mRNA sequence	NA	coding protein	psRNATarget
EZ755942.1	ncRNA:24   UUCCACCUUUAAGUCCACGUCAGC   1   *|||||*||||||||||||||||| targets:582   UAGGUGAAAAUUCAGGUGCAGUCG   605 Target Full Sequence	1.0	TSA: Arachis hypogaea CL2358Contig1.Arhy mRNA sequence	NA	coding protein	psRNATarget
EZ755476.1	ncRNA:24   UU-CCACCUUUAAGUCCACGUCAGC   1   ||-||||||||*||||||||||||| targets:1362   AAUGGUGGAAACUCAGGUGCAGUCG   1386 Target Full Sequence	1.0	TSA: Arachis hypogaea CL780Contig1.Arhy mRNA sequence	NA	coding protein	psRNATarget
JR561152.1	ncRNA:24   UU--CCACCUUUAAGUCCACGUCAGC   1   ||--||||*||||||||||||||||| targets:72   AAUUGGUGAAAAUUCAGGUGCAGUCG   97 Target Full Sequence	1.0	TSA: Arachis hypogaea Ahy.Unigene21158 mRNA sequence	NA	coding protein	psRNATarget
GAER01054132.1	ncRNA:24   UUCCACCUUUAAGUCCACGUCAGC   1   *|||||||||||||||||||||=| targets:83   UAGGUGGAAAUUCAGGUGCAGUUG   106 Target Full Sequence	1.5	TSA: Arachis hypogaea Unigene54173 mRNA sequence	NA	coding protein	psRNATarget
GAER01040999.1	ncRNA:24   UUCCACCUUUAAGUCCACGUCAGC   1   |=||||*|||*||||||||||||| targets:44   AGGGUGAAAACUCAGGUGCAGUCG   67 Target Full Sequence	2.0	TSA: Arachis hypogaea Unigene41030 mRNA sequence	NA	coding protein	psRNATarget
EZ730526.1	ncRNA:24   UUCCACCUUUAAGUCCACGUCAGC   1   **|||||||**||||||||||||| targets:155   UUGGUGGAAUCUCAGGUGCAGUCG   178 Target Full Sequence	2.0	TSA: Arachis hypogaea CL1Contig9542.Arhy mRNA sequence	NA	coding protein	psRNATarget
JR556801.1	ncRNA:24   UUCCACCUUUAAGUCCACGUCAGC   1   **|||||||**||||||||||||| targets:144   UUGGUGGAAUCUCAGGUGCAGUCG   167 Target Full Sequence	2.0	TSA: Arachis hypogaea Ahy.Unigene16625 mRNA sequence	NA	coding protein	psRNATarget
GAER01025961.1	ncRNA:24   UUCCACCUUUAAGUCCACGUCAGC   1   **|||||||**||||||||||||| targets:608   UUGGUGGAAUCUCAGGUGCAGUCG   631 Target Full Sequence	2.0	TSA: Arachis hypogaea Unigene25978 mRNA sequence	NA	coding protein	psRNATarget
EZ727045.1	ncRNA:24   UUCCACCUUUAAGUCCACGUCAGC   1   **|||||||**||||||||||||| targets:1057   UUGGUGGAAUCUCAGGUGCAGUCG   1080 Target Full Sequence	2.0	TSA: Arachis hypogaea CL1Contig6061.Arhy mRNA sequence	NA	coding protein	psRNATarget
GAER01025960.1	ncRNA:24   UUCCACCUUUAAGUCCACGUCAGC   1   **|||||||**||||||||||||| targets:1151   UUGGUGGAAUCUCAGGUGCAGUCG   1174 Target Full Sequence	2.0	TSA: Arachis hypogaea Unigene25977 mRNA sequence	NA	coding protein	psRNATarget
GAER01025962.1	ncRNA:24   UUCCACCUUUAAGUCCACGUCAGC   1   **|||||||**||||||||||||| targets:1232   UUGGUGGAAUCUCAGGUGCAGUCG   1255 Target Full Sequence	2.0	TSA: Arachis hypogaea Unigene25979 mRNA sequence	NA	coding protein	psRNATarget
GAER01019520.1	ncRNA:24   UUCCACCUUUAAGUCCACGUCAGC   1   =|||||||||*|||||||||*||| targets:3470   GAGGUGGAAACUCAGGUGCAUUCG   3493 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene19529 mRNA sequence	NA	coding protein	psRNATarget
JR552323.1	ncRNA:24   UUC--CACCUUUAAGUCCACGUCAGC   1   |||--|||||||*|||||||||||*| targets:105   AAGCGGUGGAAACUCAGGUGCAGUGG   130 Target Full Sequence	2.5	TSA: Arachis hypogaea Ahy.Unigene11992 mRNA sequence	NA	coding protein	psRNATarget
EZ750422.1	ncRNA:24   UUCCACCUUUAAGUCCACGUCAGC   1   **||||||||*||||*|||||||| targets:361   UUGGUGGAAACUCAGUUGCAGUCG   384 Target Full Sequence	2.5	TSA: Arachis hypogaea CL13676Contig1.Arhy mRNA sequence	NA	coding protein	psRNATarget
GAER01019982.1	ncRNA:24   UUCCACCUUUAAGUCCACGUCAGC   1   *|**||*||||||||||||||*|| targets:1587   CACUUGAAAAUUCAGGUGCAGACG   1610 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene19991 mRNA sequence	NA	coding protein	psRNATarget
JR542720.1	ncRNA:24   UUCCACCUUUAAGUCCACGUCAGC   1   *|**||*||||||||||||||*|| targets:1625   CACUUGAAAAUUCAGGUGCAGACG   1648 Target Full Sequence	2.5	TSA: Arachis hypogaea Ahy.Unigene2075 mRNA sequence	NA	coding protein	psRNATarget