Search result

BaseInfo

ncRNA ID	ath-miRf10398-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - CCACUCGACCACGAGGUCGGGUG - NA
Stem-loop(if miRNA)	AC         CCCA        --A    ACAUCA GAG  CACUCGACC    GGUCGAGU   GAGG      C |||  |||||||||    ||||||||   |||| CUC  GUGGGCUGG    CCAGCUCA   CUUC      C    CC         AGCA        CCA    ACUUCA
Stem-loop sequence	GAGACCACUCGACCCCCAGGUCGAGUAGAGGACAUCACCACUUCACUUCACCACUCGACCACGAGGUCGGGUGCCCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183005.1	ncRNA:23   GUGGGCUGGAGCACCAGCUCACC   1   =||=|||||||*||||||||||| targets:2015   UACUCGACCUCUUGGUCGAGUGG   2037 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:23   GUGGGCUGGAGCACCAGCUCACC   1   |||=|||||*||||||||||||* targets:1210   CACUCGACCCCGUGGUCGAGUGU   1232 Target Full Sequence	2.0	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
EF183005.1	ncRNA:23   GUGGGCUGGAGCACCAGCUCACC   1   |||=||||||||*|||||||||* targets:1865   CACUCGACCUCGAGGUCGAGUGA   1887 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183005.1	ncRNA:23   GUGGGCUGGAGCACCAGCUCACC   1   |||=|||||*||*|||||||||| targets:1924   CACUCGACCACGGGGUCGAGUGG   1946 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:23   GUGGGCUGGAGCACCAGCUCACC   1   |||=|||||*|||||||||||*| targets:490   CACUCGACCCCGUGGUCGAGUAG   512 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget