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BaseInfo

ncRNA ID novel_ahy_miR811
Species Arachis hypogaea
Class miRNA
Genome position Araip.B02:5657512-5657686 [-]
Reference genome Araip_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 152 - CGGGAAUGGAUCCUCUCAAUUGUU - 175
Stem-loop(if miRNA) --C                    ----G    ACAA       A U              CUA   C  C     --UCUCUCUU   UAUU
   GGGAAUGGAUCCUCUCAAUU     UUAA    AAUUGAG G GUAAAGUGUGAUCU   ACC UU AUUUU          UCA    U
   ||||||||||||||||||||     ||||    ||||||| | ||||||||||||||   ||| || |||||          |||
   CCUUUACCUAGGAGAGUUAA     AAUU    UUAACUC C CAUUUCACACUAGA   UGG AA UAAAA          GGU    A
UAC                    AAAAA    ---G       C U              AAG   U  U     UAUUCACCCU   UUUU
Stem-loop sequence CGGGAAUGGAUCCUCUCAAUUGUUAAACAAAAUUGAGAGUGUAAAGUGUGAUCUCUAACCCUUCAUUUUUCUCUCUUUCAUAUUUAUUUUUGGUCCCACUUAUAAAAUUAAUGGUGAAAGAUCACACUUUACUCCCUCAAUUGUUAAAAAAAAAUUGAGAGGAUCCAUUUCCCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR545269.1
ncRNA:24   UUGUUAACUCUCCUAGGUAAGGGC   1
  |||||||||||*|||||||||||*
targets:115   AACAAUUGAGAAGAUCCAUUCCCA   138

2.5 TSA: Arachis hypogaea Ahy.Unigene4675 mRNA sequence NA coding protein psRNATarget
GAER01029562.1
ncRNA:24   UUGUUAACUCUCCUAGGUAAGGGC   1
  ||*|||||||||||||||||=||*
targets:227   AAAAAUUGAGAGGAUCCAUUUCCC   250

2.5 TSA: Arachis hypogaea Unigene29582 mRNA sequence NA coding protein psRNATarget
EZ752020.1
ncRNA:24   UUGUUAACUCUCCUAGGUAAGGGC   1
  **||*||||||||*|||||||||*
targets:424   UUCACUUGAGAGGUUCCAUUCCCA   447

2.5 TSA: Arachis hypogaea CL1793Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01001252.1
ncRNA:24   UUGUUAACUCUCCUAGGUAAGGGC   1
  ||||||**|||||||||||||||*
targets:69   AACAAUGAAGAGGAUCCAUUCCCC   92

3.0 TSA: Arachis hypogaea Unigene1253 mRNA sequence NA coding protein psRNATarget
GAER01001253.1
ncRNA:24   UUGUUAACUCUCCUAGGUAAGGGC   1
  ||||||**|||||||||||||||*
targets:69   AACAAUGAAGAGGAUCCAUUCCCC   92

3.0 TSA: Arachis hypogaea Unigene1254 mRNA sequence NA coding protein psRNATarget