ncRNA ID | novel_ahy_miR811 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Araip.B02:5657512-5657686 [-] |
Reference genome | Araip_v1.0 |
Source | SRR2922380 |
Length | 24 |
Mature sequence(if miRNA) | 152 - CGGGAAUGGAUCCUCUCAAUUGUU - 175 |
Stem-loop(if miRNA) |
--C                    ----G    ACAA       A U              CUA   C  C     --UCUCUCUU   UAUU    GGGAAUGGAUCCUCUCAAUU     UUAA    AAUUGAG G GUAAAGUGUGAUCU   ACC UU AUUUU          UCA    U    ||||||||||||||||||||     ||||    ||||||| | ||||||||||||||   ||| || |||||          |||    CCUUUACCUAGGAGAGUUAA     AAUU    UUAACUC C CAUUUCACACUAGA   UGG AA UAAAA          GGU    A UAC                    AAAAA    ---G       C U              AAG   U  U     UAUUCACCCU   UUUU |
Stem-loop sequence | CGGGAAUGGAUCCUCUCAAUUGUUAAACAAAAUUGAGAGUGUAAAGUGUGAUCUCUAACCCUUCAUUUUUCUCUCUUUCAUAUUUAUUUUUGGUCCCACUUAUAAAAUUAAUGGUGAAAGAUCACACUUUACUCCCUCAAUUGUUAAAAAAAAAUUGAGAGGAUCCAUUUCCCAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
JR545269.1 |
|
2.5 | TSA: Arachis hypogaea Ahy.Unigene4675 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01029562.1 |
|
2.5 | TSA: Arachis hypogaea Unigene29582 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ752020.1 |
|
2.5 | TSA: Arachis hypogaea CL1793Contig1.Arhy mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01001252.1 |
|
3.0 | TSA: Arachis hypogaea Unigene1253 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01001253.1 |
|
3.0 | TSA: Arachis hypogaea Unigene1254 mRNA sequence | NA | coding protein | psRNATarget |