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BaseInfo

ncRNA ID novel_ahy_miR808
Species Arachis hypogaea
Class miRNA
Genome position Araip.B09:122312342-122312549 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 185 - AUUAACUGAUAGCAUACAUGACAC - 208
Stem-loop(if miRNA) --A    C          C    C  AUAAC          A  CG            C    C      A   C            AGG  -AU    G   UA
   UUAA UGAUAGCAUA AUGA AC     AUGUUUAAUU GA  UUGACUAAAUAU UUUA GAAAAU UAU AAUUUAGUUAUU   UC   AUUA GAA  A
   |||| |||||||||| |||| ||     |||||||||| ||  |||||||||||| |||| |||||| ||| ||||||||||||   ||   |||| |||  G
   AAUU ACUAUUGUAU UAUU UG     UACAGAUUAA CU  AACUGAUUUAUA AAAU CUUUUA AUA UUAAAUCAGUAA   AG   UAAU UUU  A
UGC    A          A    A  GACUA          C  AU            U    A      -   A            -AA  AGU    G   UU
Stem-loop sequence AUUAACUGAUAGCAUACAUGACACAUAACAUGUUUAAUUAGACGUUGACUAAAUAUCUUUACGAAAAUAUAUCAAUUUAGUUAUUAGGUCAUAUUAGGAAUAAGAUUUUUGUAAUUGAGAAAAAUGACUAAAUUAAUAAUUUUCAUAAAUAUAUUUAGUCAAUAUCCAAUUAGACAUAUCAGGUAUUAUAUAUGUUAUCAAUUAACGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ747421.1
ncRNA:24   CACAGUACAUACGAUAGUCAAUUA   1
  ||||||||||||||||||||||||
targets:725   GUGUCAUGUAUGCUAUCAGUUAAU   748

0.0 TSA: Arachis hypogaea CL19737Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01049126.1
ncRNA:24   CACAGUACAUACGAUAGUCAAUUA   1
  *|||=*|*|||||||||||||||*
targets:47   UUGUUUUAUAUGCUAUCAGUUAAA   70

3.0 TSA: Arachis hypogaea Unigene49163 mRNA sequence NA coding protein psRNATarget
EZ735986.1
ncRNA:24   CACAGUACAUACGAUAGUCAAUUA   1
  *|||=*|*|||||||||||||||*
targets:18   UUGUUUUAUAUGCUAUCAGUUAAA   41

3.0 TSA: Arachis hypogaea CL1Contig15002.Arhy mRNA sequence NA coding protein psRNATarget