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BaseInfo

ncRNA ID novel_ahy_miR802
Species Arachis hypogaea
Class miRNA
Genome position Araip.B02:87164742-87164916 [+]
Reference genome Araip_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 152 - UAAUUAGGACUACUAGGUAUGUGU - 175
Stem-loop(if miRNA)      --CA   A          UA UA            U                      AA    --A     A    GAA UUGU
ACACA    UAG AGUCUUAAUU  C  UUAAUAUGAUAA UUUAUGAAAUUAGAUCAAAUCA  AUCU   AUUGA GGAA   C    G
|||||    ||| ||||||||||  |  |||||||||||| ||||||||||||||||||||||  ||||   ||||| ||||   |
UGUGU    AUC UCAGGAUUAA  G  GAUUGUAUUAUU AAAUACUUUAAUCUAGUUUAGU  UAGG   UAACU CCUU   G    G
     AUGG   A          UC CC            U                      --    GUA     -    AAG UUAC
Stem-loop sequence ACACACAUAGAAGUCUUAAUUUACUAUUAAUAUGAUAAUUUUAUGAAAUUAGAUCAAAUCAAAAUCUAAUUGAAGGAAGAACUUGUGGCAUUGGAAUUCCUCAAUAUGGGAUUGAUUUGAUCUAAUUUCAUAAAUUUAUUAUGUUAGCCGCUAAUUAGGACUACUAGGUAUGUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ745528.1
ncRNA:24   UGUGUAUGGAUCAUCAGGAUUAAU   1
  ||||||||||||||||||||||||
targets:903   ACACAUACCUAGUAGUCCUAAUUA   926

0.0 TSA: Arachis hypogaea CL7423Contig1.Arhy mRNA sequence NA coding protein psRNATarget