ncRNA ID | novel_ahy_miR800 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Araip.B08:9924517-9924714 [-] |
Reference genome | Araip_v1.0 |
Source | SRR1323745 |
Length | 24 |
Mature sequence(if miRNA) | 175 - CGAUAAUCUGGAGAACAAGUAGAA - 198 |
Stem-loop(if miRNA) |
--       C       C     G      G                        A                            AUAAUAUAAAUAAAA   CGAUAAU UGGAGAA AAGUA AAGCUC AGAGGCAUAAAAUCAACCAUUGAU CAUCAAUACAUUUAUUUAUUAUUUUUUU               U   ||||||| ||||||| ||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||   GCUAUUA ACCUUUU UUCAU UUCGAG UCUUCGUGUUUUAGUUGGUAACUA GUAGUUAUGUAAAUAAAUAGUAAAAGAA               A UA       A       A     G      A                        C                            AUCAAAAUAUCUUUU |
Stem-loop sequence | CGAUAAUCUGGAGAACAAGUAGAAGCUCGAGAGGCAUAAAAUCAACCAUUGAUACAUCAAUACAUUUAUUUAUUAUUUUUUUAUAAUAUAAAUAAAAUAUUUUCUAUAAAACUAAAGAAAAUGAUAAAUAAAUGUAUUGAUGCAUCAAUGGUUGAUUUUGUGCUUCUAGAGCUUGUACUUAUUUUCCAAAUUAUCGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GAER01013270.1 |
|
1.0 | TSA: Arachis hypogaea Unigene13278 mRNA sequence | NA | coding protein | psRNATarget |