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BaseInfo

ncRNA ID novel_ahy_miR800
Species Arachis hypogaea
Class miRNA
Genome position Araip.B08:9924517-9924714 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 175 - CGAUAAUCUGGAGAACAAGUAGAA - 198
Stem-loop(if miRNA) --       C       C     G      G                        A                            AUAAUAUAAAUAAAA
  CGAUAAU UGGAGAA AAGUA AAGCUC AGAGGCAUAAAAUCAACCAUUGAU CAUCAAUACAUUUAUUUAUUAUUUUUUU               U
  ||||||| ||||||| ||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
  GCUAUUA ACCUUUU UUCAU UUCGAG UCUUCGUGUUUUAGUUGGUAACUA GUAGUUAUGUAAAUAAAUAGUAAAAGAA               A
UA       A       A     G      A                        C                            AUCAAAAUAUCUUUU
Stem-loop sequence CGAUAAUCUGGAGAACAAGUAGAAGCUCGAGAGGCAUAAAAUCAACCAUUGAUACAUCAAUACAUUUAUUUAUUAUUUUUUUAUAAUAUAAAUAAAAUAUUUUCUAUAAAACUAAAGAAAAUGAUAAAUAAAUGUAUUGAUGCAUCAAUGGUUGAUUUUGUGCUUCUAGAGCUUGUACUUAUUUUCCAAAUUAUCGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01013270.1
ncRNA:24   AAGAUGAACAAGAGGUCUAAUAGC   1
  ||*||=||||||||||||||||||
targets:23   UUGUAUUUGUUCUCCAGAUUAUCG   46

1.0 TSA: Arachis hypogaea Unigene13278 mRNA sequence NA coding protein psRNATarget