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BaseInfo

ncRNA ID novel_ahy_miR798
Species Arachis hypogaea
Class miRNA
Genome position Araip.B09:127447275-127447414 [-]
Reference genome Araip_v1.0
Source SRR1323745;SRR2922380;SRR2922381
Length 22
Mature sequence(if miRNA) 119 - GGAGUGAAACUGAGAACACAAA - 140
Stem-loop(if miRNA) --  A    AA            A        --U       -UU  GAA       AUC   U      U   U
  GG GUGA  CUGAGAACACAA GUAAAUUG   UUCGGAG   UG   UGCCAUA   ACA GCAUAA GCA U
  || ||||  |||||||||||| ||||||||   |||||||   ||   |||||||   ||| |||||| |||
  CC CACU  GACUCUUGUGUU CAUUUAAU   AAGCUUU   AC   AUGGUAU   UGU CGUAUU CGU U
UU  C    -G            C        UUU       UAU  ---       --A   U      -   A
Stem-loop sequence GGAGUGAAACUGAGAACACAAAGUAAAUUGUUUCGGAGUUUGGAAUGCCAUAAUCACAUGCAUAAUGCAUUUAUGCUUAUGCUUGUAUAUGGUACAUAUUUUCGAAUUUUAAUUUACCUUGUGUUCUCAGGUCACCCCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR589144.1
ncRNA:22   AAACACAAGAGUCAAAGUGAGG   1
  ***|||||||||*|||||||||
targets:137   CCGGUGUUCUCACUUUCACUCC   158

1.5 TSA: Arachis hypogaea Ahy.Unigene57572 mRNA sequence NA coding protein psRNATarget
JR541936.1
ncRNA:22   AAACACAAGAGUCAAAGUGAGG   1
  *|***||||||||||||||||*
targets:1575   CUAACGUUCUCAGUUUCACUCG   1596

3.0 TSA: Arachis hypogaea Ahy.Unigene1264 mRNA sequence NA coding protein psRNATarget
GAER01029474.1
ncRNA:22   AAACACAAGAGUCAAAGUGAGG   1
  *|***||||||||||||||||*
targets:1424   CUAACGUUCUCAGUUUCACUCG   1445

3.0 TSA: Arachis hypogaea Unigene29494 mRNA sequence NA coding protein psRNATarget