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BaseInfo

ncRNA ID novel_ahy_miR782
Species Arachis hypogaea
Class miRNA
Genome position Araip.B08:117695012-117695078 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 44 - UGAGAUACUGAGACAGAGACUGGG - 67
Stem-loop(if miRNA) --  UG        UG         CUAU    U
  CA  CUUUGUUU  GUAUCUCAA    CAGG A
  ||  ||||||||  |||||||||    |||| G
  GU  GAGACAGA  CAUAGAGUU    GUUU C
GG  CA        GU         --UU    G
Stem-loop sequence CAUGCUUUGUUUUGGUAUCUCAACUAUCAGGUAGCGUUUGUUUUGAGAUACUGAGACAGAGACUGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01008348.1
ncRNA:24   GGGUCAGAGACAGAGUCAUAGAGU   1
  |=|||||||||||||||||*||||
targets:103   CUCAGUCUCUGUCUCAGUACCUCA   126

1.5 TSA: Arachis hypogaea Unigene8355 mRNA sequence NA coding protein psRNATarget
GAER01013891.1
ncRNA:24   GGGUCAGAGACAGAGUCAUAGAGU   1
  *=||*||||||||||||||*||||
targets:2598   GUCAAUCUCUGUCUCAGUACCUCA   2621

1.5 TSA: Arachis hypogaea Unigene13899 mRNA sequence NA coding protein psRNATarget
JR550840.1
ncRNA:24   GGGU--CAGAGACAGAGUCAUAGAGU   1
  **||--|||||||||||||*|||||*
targets:298   AGCAUUGUCUCUGUCUCAGAAUCUCU   323

2.5 TSA: Arachis hypogaea Ahy.Unigene10465 mRNA sequence NA coding protein psRNATarget
GAER01057210.1
ncRNA:24   GGGU--CAGAGACAGAGUCAUAGAGU   1
  **||--|||||||||||||*|||||*
targets:295   AGCAUUGUCUCUGUCUCAGAAUCUCU   320

2.5 TSA: Arachis hypogaea Unigene57255 mRNA sequence NA coding protein psRNATarget
GAER01015050.1
ncRNA:24   GGGUCAGAGACAGAGUCAUAGAGU   1
  *=||*||||*||||||||*|||||
targets:2   AUCACUCUCAGUCUCAGUCUCUCA   25

2.5 TSA: Arachis hypogaea Unigene15058 mRNA sequence NA coding protein psRNATarget
GAER01027786.1
ncRNA:24   GGGUCAGA-GACAGAGUCAUAGAGU   1
  =|=|*|||-|||||||||||||||*
targets:157   UCUACUCUUCUGUCUCAGUAUCUCU   181

3.0 TSA: Arachis hypogaea Unigene27804 mRNA sequence NA coding protein psRNATarget
JR557574.1
ncRNA:24   GGGUCAGA-GACAGAGUCAUAGAGU   1
  =|=|*|||-|||||||||||||||*
targets:21   UCUACUCUUCUGUCUCAGUAUCUCU   45

3.0 TSA: Arachis hypogaea Ahy.Unigene17419 mRNA sequence NA coding protein psRNATarget