Search result

BaseInfo

ncRNA ID ath-miRf10394-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - AGAAGACUCCGAAGCUGGCA - NA
Stem-loop(if miRNA)   G    G  G  A   --          --U    U C   U   C A
UG UCGA UG UA GCU  GGAGUCUUCU   UUCU C UUU GCU G G
|| |||| || || |||  ||||||||||   |||| | ||| ||| | U
AU AGCU AC GU CGA  CCUCAGAAGA   AAGA G AAG UGA C G
  G    G  G  -   AG          UAU    C U   U   U U
Stem-loop sequence UGGUCGAGUGGUAAGCUGGAGUCUUCUUUUCUUCCUUUUGCUCGAGUGUCUAGUUGAAUGCAGAAUAUAGAAGACUCCGAAGCUGGCAGUCGAGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
DQ069808.1
ncRNA:20   ACGGUCGAAGCCUCAGAAGA   1
  *|||||||||*|||||||||
targets:396   CGCCAGCUUCAGAGUCUUCU   415

1.5 Arabidopsis thaliana At2g10880 mRNA, partial sequence NA coding protein psRNATarget
EF183192.1
ncRNA:20   ACGGUCGAAGCCUCAGAAGA   1
  |||=||||||*|||||||||
targets:761   UGCUAGCUUCAGAGUCUUCU   780

2.5 Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence NA coding protein psRNATarget
EF183193.1
ncRNA:20   ACGGUCGAAGCCUCAGAAGA   1
  |||=||||||*|||||||||
targets:1088   UGCUAGCUUCAGAGUCUUCU   1107

2.5 Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence NA coding protein psRNATarget
EF183191.1
ncRNA:20   ACGGUCGAAGCCUCAGAAGA   1
  |||=||||||*|||||||||
targets:1136   UGCUAGCUUCAGAGUCUUCU   1155

2.5 Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence NA coding protein psRNATarget