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BaseInfo

ncRNA ID novel_ahy_miR771
Species Arachis hypogaea
Class miRNA
Genome position Araip.B07:7081087-7081277 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - GUGGGAUGAACUAAGACUCGACGG - 24
Stem-loop(if miRNA) --                                                --                         ---------  U    CGAUUU  G
  GUCGAGUCUUAGUUCAUCCCACACAACGGAACCGGAUAUUCACUGCAC  AAAAAGGUGUUGGAGGAAAACCAUU         GG ACCU      GU A
  ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||         || ||||      || A
  CAGCUCAGAAUCAAGUAGGGUGUGUUGCCUUGGCCUAUAAGUGACGUG  UUUUUCCACAACCUCCUUUUGGUGA         CC UGGG      CA U
GG                                                CU                         UGAACUAGU  -    --AAGU  A
Stem-loop sequence GUCGAGUCUUAGUUCAUCCCACACAACGGAACCGGAUAUUCACUGCACAAAAAGGUGUUGGAGGAAAACCAUUGGUACCUCGAUUUGUGAAUAACUGAAGGGUCCUGAUCAAGUAGUGGUUUUCCUCCAACACCUUUUUUCGUGCAGUGAAUAUCCGGUUCCGUUGUGUGGGAUGAACUAAGACUCGACGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR545442.1
ncRNA:24   GGCAGCUCAGAAUCAAGUAGGGUG   1
  |=|-||||*||||*||||||||||
targets:3   CUG-CGAGGCUUAAUUCAUCCCAC   25

2.5 TSA: Arachis hypogaea Ahy.Unigene4853 mRNA sequence NA coding protein psRNATarget